New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 12078057 (0.190)30 (0.920) 26/242 NT 79.8% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA = 1209602 9 (0.280)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

CATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATA  >  NC_000913_3_hsa_tpiA/1207658‑1207951
                                                                                                                                                   |                                                                                                                                                  
cagcgcgttcatttgtagatctttgttctggtctttttttgattcgcgtacagagccaataagcatgttaaatcccccttctaaaagcaggaatgatgccttttgcttgttatttcttcattttcataaacgTTGGTTTTGGAGAAGGa                                                                                                                                                   >  2:302702‑M1/133‑149 (MQ=255)
      gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                             <  1:651674/149‑1 (MQ=255)
      gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                             <  1:396753/149‑1 (MQ=255)
           aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacc                                                                                                                                        >  2:579869‑M1/1‑137 (MQ=255)
               tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                    <  1:624979/149‑1 (MQ=255)
                ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcatcacctgtta                                                                                                                                   >  2:573634‑M1/1‑132 (MQ=255)
                 gagaAGGGGCGGCACGACCAGGTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                                  <  1:385175‑M1/149‑19 (MQ=255)
                  agcagggGCGGCACGACCAGTTACTCACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                                                                                 <  1:69366‑M1/146‑20 (MQ=255)
                       gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                            <  1:673904‑M1/149‑25 (MQ=255)
                             cacaACCAGTTACTTACCGCACTTCGCTCGCTGCTGTTAAACCGCAAGAATCCGTTTGGCGCTATCAAATAGGATGGCACTGTCCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctcagcattacctgttggtgtcccggttcc                                                                                                                      >  2:396691‑M1/1‑119 (MQ=255)
                             aaccaccagTTACTTACCTGACTTCGCGCGGTGTTGATAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcc                                                                                                                      <  2:503446‑M1/145‑31 (MQ=255)
                              aCGTCCAGGTACTTAACGACCCTCGCGCGTTGCTGTTAAGCCGCAAGAATCCGTTGGGTGATATAAAATTGGATGGCACTGCGCTAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgtattacctgttggtgtcccggttccg                                                                                                                     <  2:195514‑M1/149‑32 (MQ=255)
                                 atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACCGCTACATtagac                                                                                                                  <  2:368360‑M1/50‑3 (MQ=255)
                                         cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAACCCTGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                          <  1:161500‑M1/149‑43 (MQ=255)
                                         cttacCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtatgtgtcccagttccgtgcgcttcagc                                                                                                          >  2:588239‑M1/1‑107 (MQ=255)
                                             gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                      <  1:450165‑M1/62‑1 (MQ=255)
                                                     agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAACAACGCGTACATGAGGACGCACCGGTTTCATAGCtat                                                                                              <  1:364062‑M1/70‑1 (MQ=255)
                                                      gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                                                                                             <  1:361711‑M1/149‑56 (MQ=255)
                                                       cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccag                                                                                            >  2:418357‑M1/1‑93 (MQ=255)
                                                        caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                                           <  1:162714‑M1/73‑1 (MQ=255)
                                                          gctgctGTTAAGCCGCAGGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGAAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctccattacctgttggtgtcccggttcggtcgccttccaccaccccgcataccggct                                                                                         >  2:447373‑M1/1‑90 (MQ=255)
                                                          gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                         <  1:578499/149‑1 (MQ=255)
                                                           tgagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATTCAAGAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                        >  1:447160‑M1/74‑149 (MQ=255)
                                                               catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattaacataaccgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCtataccgcatata                                                                                    <  2:598986‑M1/80‑7 (MQ=255)
                                                                gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                                                                                   >  1:637666‑M1/1‑84 (MQ=255)
                                                                gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtagccttcagccactcagccaaaaggctggctga                                                                                   >  2:660776‑M1/1‑84 (MQ=255)
                                                                 ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGctctgcattaccagtgggtgtcccggttccgtgcccctcagccactccgccaacaggctggctgaa                                                                                  >  2:363380‑M1/1‑83 (MQ=255)
                                                                   ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGGTACATTAGGACGCACCGGTTTCATAGCTATACAGGTGATGATtg                                                                                <  1:689591‑M1/84‑1 (MQ=255)
                                                                     aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                              >  1:347166‑M1/64‑149 (MQ=255)
                                                                       cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattccctgttggtgtcccggttcagtggccttccgcacctccgccaacacgctggctgaactgcaa                                                                            >  2:96668‑M1/1‑77 (MQ=255)
                                                                       aaacccgttgtaaaaggaggacaggtgtcatttgcttgttatttctacattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                                            <  2:501241‑M1/88‑1 (MQ=255)
                                                                         cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg                                                                          >  2:81985‑M1/1‑75 (MQ=255)
                                                                           ccctggtaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                        <  1:347215‑M1/92‑1 (MQ=255)
                                                                           ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGATGTACCGGTTTCATGGCTATCCCGGTTATGATTGGTGGTAtt                                                                        <  2:458396‑M1/92‑1 (MQ=255)
                                                                           ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                        >  1:352979‑M1/58‑149 (MQ=255)
                                                                            gAATCCGTGTGGCGATCTCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg                                                                       <  2:580643‑M1/149‑78 (MQ=255)
                                                                              tgccGTTTGGCGATATCAAATCGGATGGCACTGTGCGAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGAACCGGTTTCTTAGCTATATCGGTTATGATTGGTGGTATTGAg                                                                     <  1:550371/147‑1 (MQ=255)
                                                                              aTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAAGCTGGGTTTGGGTGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtccc                                                                     >  2:669428‑M1/1‑70 (MQ=255)
                                                                                  aaaagcaggaatgatgccatttgcttgttatttcttcattttcatagacgTTGTTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                                 >  1:478906‑M1/51‑149 (MQ=255)
                                                                                   tttGGCGATATCAACTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                                <  1:34088‑M1/149‑85 (MQ=255)
                                                                                             tgtttggatttgcttgttatttattcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGTACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                      >  2:452415‑M1/40‑149 (MQ=255)
                                                                                                   cGGATGGCACTGTGCAAACGGCCCTCGAAACCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGCTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                                <  1:177226/149‑1 (MQ=255)
                                                                                                     tttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                              >  2:27804‑M1/32‑149 (MQ=255)
                                                                                                        ggCAGTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgga                                           <  1:438426‑M1/149‑106 (MQ=255)
                                                                                                        gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                                           >  1:644308‑M1/29‑149 (MQ=255)
                                                                                                          ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                         <  2:3388‑M1/123‑1 (MQ=255)
                                                                                                           tgttatttctttattttcataaacgTGGGTTTCGGAGAAGGACAAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                        >  1:175640‑M1/26‑149 (MQ=255)
                                                                                                           tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                        >  1:174940‑M1/26‑149 (MQ=255)
                                                                                                           aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaaaggctgggtgaaatgcaatggtggcgctttttctgctgaagactacccagaact                                        >  2:69777‑M1/1‑41 (MQ=255)
                                                                                                                  tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                                 <  1:301085‑M1/131‑1 (MQ=255)
                                                                                                                    ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATAGGTGGTATTGAGCAATCAGTAATTATTCAGTGGGGGTGGAATGCCGCaaa                               >  1:570979‑M1/17‑149 (MQ=255)
                                                                                                                    aCGGCTCTCGAAAGCTGTGGTTTGGGAGAAGGctctgcattacctgttggcgtcccggttcggtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatccccggaactggcgaaggc                               <  2:161530‑M1/149‑118 (MQ=255)
                                                                                                                    aCGGCTCTCGAAACCCTGGGTTGGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                               <  1:76234‑M1/149‑118 (MQ=255)
                                                                                                                    aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                               <  1:424522‑M1/149‑118 (MQ=255)
                                                                                                                     cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct                              >  2:332878‑M1/1‑31 (MQ=255)
                                                                                                                       attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                            <  1:348437‑M1/136‑1 (MQ=255)
                                                                                                                        ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa                           <  1:301166‑M1/137‑1 (MQ=255)
                                                                                                                         tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc                          >  2:217938‑M1/1‑27 (MQ=255)
                                                                                                                            cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                       <  1:368971‑M1/149‑126 (MQ=255)
                                                                                                                            cGAAAACCTGGGGCTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                       <  2:656308‑M1/149‑126 (MQ=255)
                                                                                                                             ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc                      <  1:691696‑M1/142‑1 (MQ=255)
                                                                                                                                aaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaa                   <  1:81985‑M1/149‑130 (MQ=255)
                                                                                                                                   gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                <  2:141040‑M1/148‑1 (MQ=255)
                                                                                                                                   cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACCGCTACATTTGGACGCACAGGTTTCATAGCTATACCAGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTTGAGTGCCGCAAAACCACATCCCTCTgc                >  2:529529/1‑148 (MQ=255)
                                                                                                                                    TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg               >  2:369323‑M1/1‑149 (MQ=255)
                                                                                                                                        tttGGGGGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc           <  1:1043‑M1/149‑138 (MQ=255)
                                                                                                                                        tttGGGAGAAGGctctgcagtacctgttggtgtccaggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc           <  2:375460‑M1/149‑138 (MQ=255)
                                                                                                                                         ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcc          <  1:681180‑M1/149‑139 (MQ=255)
                                                                                                                                           GGGAGAAGGAGCAAAACTGAATGCAGCAACGGCTACATTAGGAGGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATTAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATg        >  2:215424‑M1/1‑149 (MQ=255)
                                                                                                                                             gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacgcggaactggcaaaggcttatccgacaaataaattgcctgat      >  1:581394‑M1/1‑7 (MQ=255)
                                                                                                                                             gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctggaatgcaatggtgccgctttttccgctgcacaatcctcactagtgtcaaaggcttatacgagacataaattgcctgat      >  2:594533‑M1/1‑7 (MQ=255)
                                                                                                                                             GAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCCGGGGGGGAtggg      <  2:446080‑M1/149‑2 (MQ=255)
                                                                                                                                               GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa    >  2:450165‑M1/1‑149 (MQ=255)
                                                                                                                                               GAAGGAACAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa    >  2:686593‑M1/1‑149 (MQ=255)
                                                                                                                                                 aGGctctgaattaccttttggtgtcccggttccgtggccttcagccactccgccaacaggctgtctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttac  <  1:617163‑M1/149‑147 (MQ=255)
                                                                                                                                                 AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATa  >  1:396006‑M1/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATA  >  NC_000913_3_hsa_tpiA/1207658‑1207951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.