New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 15151825 (1.050)7 (0.320) 5/264 2.3 22.5% coding (82/597 nt) yadK putative fimbrial‑like adhesin protein
?NC_000913_3_hsa_tpiA = 151522 25 (1.130)coding (78/597 nt) yadK putative fimbrial‑like adhesin protein

GATAACTTTCAGGAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAATGTGGCTGGTGCAGAAAA  >  NC_000913_3_hsa_tpiA/151383‑151664
                                                                                                                                            |                                                                                                                                              
gATAACTTTCAGGAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGCCAACAAGGTCAATATCCTTTCCAGCAATGcctggacag                                                                                                                                       <  2:179134‑M2/149‑10 (MQ=255)
 aTAACTTTCAGGAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACGCTGGTTACTGATTCCGCTTTTGCAGGTGATGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacagg                                                                                                                                      <  2:317619‑M2/149‑11 (MQ=255)
   aaCTTTCAGGAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTTGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCg                                                                                                                                    >  2:216560/1‑149 (MQ=255)
           ggAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGTGATGCaaaa                                                                                                                            <  2:133495/149‑1 (MQ=255)
                  cATTACCTGAAAAATATCCCACCCCGACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAAt                                                                                                                     <  1:379221/149‑1 (MQ=255)
                   aTTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATg                                                                                                                    >  1:250512/1‑149 (MQ=255)
                               ctctCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGacagaaacagaa                                                                                                        <  1:22851/146‑1 (MQ=255)
                                       ccccAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATtctc                                                                                                <  1:315281/149‑1 (MQ=255)
                                         ccAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCtt                                                                                              <  2:157963/149‑1 (MQ=255)
                                          cAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTtc                                                                                             <  2:155008/149‑1 (MQ=255)
                                                      gATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGt                                                                                 >  2:378934/1‑149 (MQ=255)
                                                       aTCAATATTACCCTGGTTACTGATTCCGCTTTAGGGTTTATGTTGTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGtt                                                                                >  1:100763/1‑149 (MQ=255)
                                                          aaTATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCAAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGACACAGAATTATTCTCTTCATCAGCTTACGTTGAg                                                                             >  1:214367/1‑149 (MQ=255)
                                                           ctatTACCCTTGTTACTGATTCCGCTCTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTTAATATCCTGTCCAGCAAGGGCTGGCCAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTTTTCATCAGCTTACGTTGAGt                                                                            <  1:64326/148‑1 (MQ=255)
                                                              ttACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTggg                                                                         <  1:167261/149‑1 (MQ=255)
                                                                                 cGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTACTGACAGAAAAAGAATTATTCTCTTCATCACCTTACCTTGTTTGTTATGCATATATAGTTCCtaa                                                      >  2:192864/1‑147 (MQ=255)
                                                                                  gCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcagaagcggaatcagtaaccagggtaatattgaacttggcgtcg                                                     <  1:138442‑M2/149‑92 (MQ=255)
                                                                                       tGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGt                                                <  1:378934/149‑1 (MQ=255)
                                                                                          aGGTGCTGTTTTTTACATTGGCAACACGGCCCGTTACCGTTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAGTCTGTAAg                                             >  1:415066/1‑149 (MQ=255)
                                                                                             tGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcggaatcagtaaccagggtaatattgatcttggcgtcgttggggtggga                                          <  2:180942‑M2/149‑103 (MQ=255)
                                                                                             tGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcggaatcagtaaccagggtaatattgatcttggcgtcgttggggtggga                                          <  2:180918‑M2/149‑103 (MQ=255)
                                                                                               cTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTgt                                        <  1:177289/149‑1 (MQ=255)
                                                                                                tGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCa                                                                    <  2:9394/120‑1 (MQ=255)
                                                                                                tGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCa                                                                    >  1:9394/1‑120 (MQ=255)
                                                                                                       ttACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcggaatcagtaaccagggtaatattgatcttggcgtcgttggggtgggatatttttca                                 >  1:180942‑M2/1‑38 (MQ=255)
                                                                                                       ttACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcggaatcagtaaccagggtaatattgatcttggcgtcgttggggtgggatatttttca                                 >  1:180918‑M2/1‑38 (MQ=255)
                                                                                                            ttGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGtt                            >  1:103117/1‑149 (MQ=255)
                                                                                                                 aacaaGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcg                                                                                         >  2:193487‑M2/1‑28 (MQ=255)
                                                                                                                 aacaaGGTCAATATCCTGTCCAGCAATGgctggacaggatattgaccttgttgccaatgtaaaaaacagcacctgcaaaagcg                                                                                         <  1:193487‑M2/83‑56 (MQ=255)
                                                                                                                              tCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAATGTGGCTGGt          >  2:58338/1‑149 (MQ=255)
                                                                                                                                 tGTCCAGCCATTGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAAtgt                 <  1:291013/139‑1 (MQ=255)
                                                                                                                                 tGTCCAGCCATTGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAAtgt                 >  2:291013/1‑139 (MQ=255)
                                                                                                                                     cAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAATGTGGCTGGTGCAGaaa   >  1:397450/1‑149 (MQ=255)
                                                                                                                                      aGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAATGTGGCTGGTGCAGaaaa  <  1:258907/149‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
GATAACTTTCAGGAGTAACATTACCTGAAAAATATCCCACCCCAACGACGCCAAGATCAATATTACCCTGGTTACTGATTCCGCTTTTGCAGGTGCTGTTTTTTACATTGGCAACAAGGTCAATATCCTGTCCAGCAATGGCTGGACAGGCGATGCAAAACAGTAATGACAGAAACAGAATTATTCTCTTCATCAGCTTACGTTGAGTGGGATGCATATATAGTTCCTGAATCTGTAAGTCTGTTAGTTATAGGTTACTGTAAATGTGGCTGGTGCAGAAAA  >  NC_000913_3_hsa_tpiA/151383‑151664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.