| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 2700550 = | 115 (1.230) | 14 (0.180) | 14/224 | 7.6 | 12.4% | noncoding (31/77 nt) | ohsC | sRNA antisense regulator of shoB toxin |
| ? | NC_000913_3_hsa_tpiA | 2700601 = | 100 (1.250) | intergenic (+5/+17) | ohsC/acpS | sRNA antisense regulator of shoB toxin/holo‑[acyl‑carrier‑protein] synthase 1 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/2700716‑2700550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggggttttactttttaaAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG > NC_000913_3_hsa_tpiA/2700601‑2700747 GCATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACG > 1:147110/1‑150 ATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGG > 2:25566/1‑150 AAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGT < 1:961584/150‑1 TGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACTCCCGAACTGGTAAGGAACGGGGGTTTTAC > 1:892531/1‑150 GGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACT < 1:371327/150‑1 CGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTT < 1:766547/150‑1 GAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTT < 3:125153/150‑1 AAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA < 2:1263869/150‑1 AAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA < 4:749762/150‑1 AAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA < 1:645185/150‑1 CGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTAGTAAGGAACGGGGGTTTTACT > 3:245149/1‑101 CGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTAGTAAGGAACGGGGGTTTTACT < 4:245149/101‑1 CACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAG > 3:247555/1‑150 TTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACT < 3:236087/90‑1 TTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACT > 4:236087/1‑90 GAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGG < 4:209478/63‑1 GAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGG > 3:209478/1‑63 TTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGG < 2:1986/57‑1 TTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGG > 1:1986/1‑57 ACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA < 1:942026/60‑1 ACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA > 2:942026/1‑60 CTCTTTAAAAAGGAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAG > 2:344796/1‑150 TAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTC > 1:723480/1‑144 TAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTC < 2:723480/144‑1 AAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTT > 1:350222/1‑150 AACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAACGAGAACGGTATTATTTTTAA > 1:155222/1‑61 AACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAACGAGAACGGTATTATTTTTAA < 2:155222/61‑1 CCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTT > 2:1024965/1‑110 CCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTT < 1:1024965/110‑1 CCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTC < 1:1000691/61‑1 CCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTC > 2:1000691/1‑61 TGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGC < 2:350222/150‑1 GTAAGGAACGGGGGTTTTACTTATTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATATGACCGCGTTACCTGCATCTTTGCCACGCCCAGCTTTTCCGCCAGTTTTACTGCATCGCCC > 3:667223/1‑150 gtACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAG < 1:344796/148‑1 GGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGC > 1:559874/1‑150 TTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTG > 1:515654/1‑150 TACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGG < 4:125153/150‑1 ACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGG < 2:814438/49‑1 ACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGG > 1:814438/1‑49 TTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTT < 1:893195/150‑1 TTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCA > 2:365296/1‑72 TTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCA < 1:365296/72‑1 TAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG > 2:572654/1‑150 TAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG < 1:999994/150‑1 GCATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/2700716‑2700550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggggttttactttttaaAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTTTTCCGCCAGTTTTAATGCCTCGCCCCATAGCCGTAGCCGTGGTTTGCCG > NC_000913_3_hsa_tpiA/2700601‑2700747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |