New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1911650 =110 (1.210)9 (0.110) 8/256 11.0 8.2% intergenic (+1/+45) yebQ/htpX putative transporter/putative endopeptidase
?NC_000913_3_hsa_tpiA 1911680 = 100 (1.210)intergenic (+31/+15) yebQ/htpX putative transporter/putative endopeptidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGATGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/1911807‑1911650
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcgctttttAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGT  >  NC_000913_3_hsa_tpiA/1911680‑1911827
                                                                                                                                                                                                                                                                                                                  
TGATGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACG                                                                                                                                                              <  1:161872/150‑1
   TGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGC                                                                                                                                                           >  2:895610/1‑150
      CTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTT                                                                                                                                                        >  3:654095/1‑150
        CTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTTCTGATCGACGCGCTTTTT                                                                                                                                                      <  2:1139690/150‑1
           TGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGA                                                                                                                                                                <  1:439900/137‑1
           TGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGA                                                                                                                                                                >  2:439900/1‑137
                                                                    GATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATC                                                                                          <  3:100221/150‑1
                                                                       AAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAG                                                                                       >  3:557469/1‑150
                                                                                                GTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCA                                                              >  4:25418/1‑150
                                                                                                          GAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATT                                                    >  1:1134003/1‑150
                                                                                                                 TATGAAGTACATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTC                                                                                                      >  1:840935/1‑93
                                                                                                                 TATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTC                                                                                                      <  2:840935/93‑1
                                                                                                                     AAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCG                                         <  3:25418/150‑1
                                                                                                                           aaACTAAAAAGCGCGTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATG                                   >  4:594190/3‑150
                                                                                                                                         GTCCTGATCGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCAT                     >  1:188943/1‑150
                                                                                                                                                        CTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTG      <  4:100221/150‑1
                                                                                                                                                          TTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCG    <  2:1173905/150‑1
                                                                                                                                                          TTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCG    <  4:348310/150‑1
                                                                                                                                                          TTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCG    <  4:557469/150‑1
                                                                                                                                                           TTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGG   <  1:1058688/150‑1
                                                                                                                                                           TTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGG   <  4:461248/150‑1
                                                                                                                                                            TTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGT  <  2:1236743/150‑1
                                                                                                                                                                                                                                                                                                                  
TGATGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAATATGAAGTAAATACTAAAAAGCGCGTCCTGATCGACGCGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/1911807‑1911650
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcgctttttAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTGAGCGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGT  >  NC_000913_3_hsa_tpiA/1911680‑1911827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.