Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913_3_hsa_tpiA 4,296,042 C→T 31.0% intergenic (+266/+376) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,296,0420CT31.0% 57.4 / 38.7 66intergenic (+266/+376)gltP/yjcOglutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
Reads supporting (aligned to +/- strand):  ref base C (25/19);  new base T (11/9);  total (38/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01

GGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACG  >  NC_000913_3_hsa_tpiA/4295897‑4296175
                                                                                                                                                 |                                                                                                                                     
ggATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTGTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGcc                                                                                                                                    <  1:335224/149‑1 (MQ=17)
  aTAAGGGGTTTAGGTCGCAGCTGACATCAAGGCATGAGGCGACGCTTTACGCGTCTTATCAGGCCTACGCCAGACAGCGTAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTg                                                                                                                                  <  2:193169/149‑1 (MQ=11)
  aTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGTGAGCGCGAACTTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTg                                                                                                                                  >  1:605435/1‑149 (MQ=11)
  aTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCACCGCCTg                                                                                                                                  >  1:281829/1‑149 (MQ=17)
   tAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACGGCGCAATAGCGTGCTTTGGCGTGATTTTGTAGGTCGGATAAGGGGTTTCCGCCGCATCCGACATCGAGGCCTGa                                                                                                                                 >  2:566669/1‑149 (MQ=11)
    aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                <  1:486093/149‑1 (MQ=17)
       gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCg                                                                                                                             >  1:222051/1‑149 (MQ=17)
          tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCACCGCCTGATGCGACg                                                                                                                          >  1:98226/1‑149 (MQ=17)
          tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACg                                                                                                                          >  2:366067/1‑149 (MQ=32)
             ctGCCGCCTCCTGCATCAACGCCCGCTGCGACGCTTAGCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCtt                                                                                                                       <  2:81561/148‑1 (MQ=11)
             acgCCGCATCCGGCATCACCGCCTGATGCGACGCTTAACGAGTATTACCACGCGTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCCTCCGACATCAACGCCTGATGCGACGCtt                                                                                                                       <  1:292962/147‑1 (MQ=11)
               gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc                                                                                                                     <  1:118281/149‑1 (MQ=21)
               gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGc                                                                                                                     >  1:591092/1‑149 (MQ=18)
                ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGACATCAATCCCTGATGCGACGCTCGcc                                                                                                                    >  2:196218/1‑149 (MQ=255)
                ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGcc                                                                                                                    <  1:366067/149‑1 (MQ=21)
                 cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTTTTAACAGGCCTACGCCAGACAGGACAATAGCCGGATTTAGCGTGATTTTCTAGCTCGGATAAGGCGCTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcg                                                                                                                   <  2:500705/149‑1 (MQ=11)
                 cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcg                                                                                                                   >  2:162425/1‑149 (MQ=35)
                 cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCCTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTCCcg                                                                                                                   >  2:499582/1‑149 (MQ=16)
                  gCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGAAAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc                                                                                                                  >  2:370453/1‑149 (MQ=21)
                     tacGATATCTACGTCTGTTGAGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc                                                                                                               <  1:13214/147‑1 (MQ=11)
                       cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCtt                                                                                                             >  2:459248/1‑149 (MQ=25)
                       cGACATCAACGCCTGATGCGAAGGTTAAAGAGTCTTATAAAGACTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCTGCTAAGGCGTTTACGCCGAATACGACATGAATGGCTGATGCGACGCTTGcccctgctt                                                                                                             >  2:23640/1‑142 (MQ=11)
                        gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                            >  1:487715/1‑149 (MQ=25)
                            tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCCATAGCCTGATTTCGCGTGCTTTTGTAGGTCGGATAACGCGTTTACGCCGCATCCGACATCCACGCCTGCTGCGGCCGTTGCCGCGACCTATCaa                                                                                                        >  2:31395/1‑148 (MQ=11)
                            tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                        <  1:370453/149‑1 (MQ=21)
                            tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                        >  1:503742/1‑149 (MQ=21)
                             cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                                                                                       <  1:175419/149‑1 (MQ=39)
                              aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTGGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCGCCGCAGCCGACAGCAACGCCTGATGCGCCGCTTGACGCGTCTTATcccgc                                                                                                      >  2:48114/1‑145 (MQ=11)
                              aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                      <  1:162425/149‑1 (MQ=21)
                              aaCCCCTGCTGCGACGCTTAACGCGTCCTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGTCGCCTCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                      <  1:273716/149‑1 (MQ=11)
                                   cTGATGCGACGCTTAACGCGTCTTATCAGGCTTACGCTAGACAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatc                                                                                                 <  1:315759/149‑3 (MQ=255)
                                    ggcggcggcgGTTAACGCGTGTTAGCAGTCCTATGCCAGACAGCGCAATAGCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGGCGCGTCTTATCAGGCCTACGc                                                                                                <  2:120869/145‑1 (MQ=11)
                                     gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCATCAAGGCCTGATGCGGCGCTTGCCGCGTGTTGTCAGGCCTGCggc                                                                                               >  1:211631/1‑147 (MQ=11)
                                      aTGCGACGCTTGACACGTCTTATCAGGCCTACGCCAGACAGCGCAGTAGGCTGAGTTAGCGTCATTTTGTATGTCGGATAAGACGCTTACGCCGCATCCGGCATCAATGCCTGATGCGACGCTTCTCCAGCCTTATCAGTCCTatctta                                                                                              >  2:558951/1‑144 (MQ=11)
                                           aCGCATAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACCCTTGCCGCGTCTTATCAGGCCGACGCCAgcgag                                                                                         >  2:468586/1‑145 (MQ=255)
                                             gCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCCAACCAgcg                                                                                       >  2:440387/1‑149 (MQ=255)
                                             gCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGAGGCTTATCTGGCCTACGCCAgccgggg                                                                                       >  1:379806/1‑143 (MQ=11)
                                                tgaCGCGTCTTATGAGGGCTACGCCAGGCAGCGCAATAGCCTGATTTAGGGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa                                                                                    <  2:454015/147‑1 (MQ=255)
                                                 agggcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCACCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt                                                                                   <  2:517966/146‑1 (MQ=255)
                                                  aCGTGTCTTAGCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa                                                                                  <  2:491070/149‑1 (MQ=255)
                                                    gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTCCGCCAACCTGCGCACTAGc                                                                                >  2:334216/1‑149 (MQ=11)
                                                        cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGa                                                                            >  1:202358/1‑149 (MQ=38)
                                                            ttaGGCCTACGCCAGGCAGCGTAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTa                                                                        <  1:152010/147‑1 (MQ=255)
                                                                     cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACGGCGCAATAGCCTGGTTTAGCGTGAttt                                                               >  1:243045/1‑149 (MQ=255)
                                                                       ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgcg                                                                                                                 <  1:112662/97‑1 (MQ=255)
                                                                       ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgcg                                                                                                                 >  2:112662/1‑97 (MQ=255)
                                                                        cAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTACCGTGATTTTGt                                                            >  2:475814/1‑149 (MQ=37)
                                                                         acgcggcgcAATTGCCGGACTGAGCGTGATTTTGTCGGTCGGGTATGCCCTTTCTCCCGGACCCGACATGAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATTTAGCGGGATTTTGtg                                                           <  2:346589/144‑2 (MQ=11)
                                                                             aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAGTAGCCTGATTTCGCGTGATTTTGTAGGTc                                                       >  1:308700/1‑149 (MQ=255)
                                                                                   aTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                     <  1:500041/97‑1 (MQ=255)
                                                                                   aTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                     >  2:500041/1‑97 (MQ=255)
                                                                                       ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCg                                             >  1:37941/1‑149 (MQ=38)
                                                                                       ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCCAGACAGCGCAATAGCATACTTTACCCTAATTTTGCAGGTCGGTTacgccc                                             >  2:480679/1‑144 (MQ=11)
                                                                                        cggagtgaGCGTGATTTTGTCGGTCGGATAAGGCGCTGACGCCGCAACCGATATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGt                                            <  1:280219/142‑1 (MQ=11)
                                                                                              tAGCGTTATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGc                                      <  1:517025/149‑1 (MQ=255)
                                                                                                  gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATGCTGGATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCATCGCAATAGCCTGATTTCGCGTGATTTTGTAGATCGGATCAGGCGATTATGCCGCa                                  >  2:440904/1‑149 (MQ=11)
                                                                                                    gATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCAGCGCCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCGTc                                >  2:562457/1‑149 (MQ=255)
                                                                                                       tttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                             >  1:567494/1‑149 (MQ=38)
                                                                                                          gtggggaggATAAGGCGTTTACGCCGCATCAGAGATCAACGCCTGATGCGCCGCTTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt                          <  2:374215/142‑1 (MQ=11)
                                                                                                           tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATATAGCGTGATTTTGTAGGTGAGCTAAGGCGTTTATGCCGCATCCGACATc                         >  2:385045/1‑149 (MQ=255)
                                                                                                              gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAtt                                                                          <  2:403579/97‑1 (MQ=18)
                                                                                                              gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAtt                                                                          <  2:469344/97‑1 (MQ=17)
                                                                                                                     aaGGCGTTTACGCCGCATCCGACATCAACTCCTGATGCCACGCTCGCCGCATCTGATCAGGTCTACGCCACACCGCGAAATAGCCTAATTTAGCGTGATTTTGCAGGTCGGATAAGGCGTTTATGGCGCATCCGACATCAACGCCTGAt               >  1:520937/1‑149 (MQ=11)
                                                                                                                     aaGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACGGCGCAATGGTCTGCTTTAGCGTGATTTTGTAGTTGGGATAAGGACTTGAAGCCGCATCCAACATCGACGCATGAt               >  1:98610/1‑149 (MQ=11)
                                                                                                                            ttACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGc        <  1:323628/149‑1 (MQ=39)
                                                                                                                                  cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGAcg  >  1:500705/1‑149 (MQ=25)
                                                                                                                                                 |                                                                                                                                     
GGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACG  >  NC_000913_3_hsa_tpiA/4295897‑4296175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: