| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_hsa_tpiA | 1,748,487 | A→T | I453F (ATC→TTC) | ydhS → | putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_tpiA | 1,748,487 | 0 | A | T | 100.0% | 39.1 / NA | 14 | I453F (ATC→TTC) | ydhS | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (9/5); total (9/5) | |||||||||||
TCATTCATATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATATCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGC > NC_000913_3_hsa_tpiA/1748347‑1748631 | tcattcatATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTAACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGTAAGATTTCCCTTTc > 2:228152/1‑149 (MQ=255) ttcatATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAATACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGGCTTCCGTTTCCCt < 2:113903/149‑1 (MQ=255) aTGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCt < 2:386711/149‑1 (MQ=255) gAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATtata > 1:105604/1‑149 (MQ=255) aacaGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAAcc > 2:38582/1‑149 (MQ=255) tCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGatat > 1:12058/1‑149 (MQ=255) gACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTgg < 1:257192/149‑1 (MQ=255) gACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTAGCGAAGTCACTACCTTACACCAACCCGAAAACATTCGTga > 2:128098/1‑148 (MQ=255) gTTTGTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGgcg > 2:320727/1‑149 (MQ=255) aCAACGTGCGCTTAAAGCGAAAGAGTTCCCTTTGCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCGGATGTTGGCGAAGATTATACGTTACAGCAATCCGAAGATATGCGTGGGCGCGTAGCGTGCGGCGCGTTga < 2:190236/149‑2 (MQ=255) aaCGTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGAAATGTCAGTAAAGAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGccc > 2:385118/1‑149 (MQ=255) gTCCGCTTAAAGTGAAAGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTgg > 2:153522/1‑149 (MQ=255) atctgCTTAAAGTGAAAGATTTCCATTTCCCTGGGCTACGCGGGCAATTGCAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTgg > 1:84928/5‑149 (MQ=255) aGATTTCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGc < 1:38582/149‑1 (MQ=255) | TCATTCATATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATATCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGC > NC_000913_3_hsa_tpiA/1748347‑1748631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |