New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2035297	122 (0.910)	18 (0.150)	16/242	12.9	13.9%	intergenic (+54/‑538)	yedS/hchA	pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone
	?	NC_000913_3_hsa_tpiA	= 2035305	112 (0.920)					intergenic (+62/‑530)	yedS/hchA	pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/2035137‑2035297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCAG  <  NC_000913_3_hsa_tpiA/2035305‑2035157                                                                                                                                                                                                                                                                                                                        ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTA                                                                                                                                                                  <  2:463421/150‑1    TTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCC                                                                                                                                                               >  2:958545/1‑150      GATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTG                                                                                                                                                             >  1:1477065/1‑150       ataACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGA                                                                                                                                                            <  1:217233/147‑1       ATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGA                                                                                                                                                            <  1:829967/150‑1       ATTACAAAATCAACCTGATGGTCAACTACGATGATTTCTAAGCAGACGACGGCATCGAAACCGATGATATCGTTCCTGTGGGCTTAGTCTAGCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGA                                                                                                                                                            <  1:674818/150‑1        TTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAG                                                                                                                                                           <  4:339545/150‑1         TACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT                                                                                                                                                          >  1:600226/1‑150           CAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTC                                                                                                                                                        >  2:1449878/1‑150                  cACCTTCTGGACAATGACGATGTTTTTTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGG                                                                                                                                                 <  3:237858/149‑1                            ACAACGACGATGACTACTACGTAGCAAACGTCATCGCTACCGATGATATCTTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA                                                                                                                                       <  4:416659/150‑1                             CAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAG                                                                                                                                      <  2:186768/150‑1                               ACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGC                                                                                                                                    <  3:522123/150‑1                                     ATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT                                                                                                                                                          >  4:433393/1‑122                                     ATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT                                                                                                                                                          <  3:433393/122‑1                                             TACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTT                                                                                                                      >  4:916151/1‑150                                             TACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAG                                                                                                                                      <  4:767535/134‑1                                             TACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAG                                                                                                                                      >  3:767535/1‑134                                               CGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTAC                                                                                                                    <  3:916151/150‑1                                                      AACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACA                                                                                                             <  2:600226/150‑1                                                         GGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGC                                                                                                          <  2:1465811/150‑1                                                                                                TACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGA                                                                                                                                               <  2:179110/74‑1                                                                                                TACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGA                                                                                                                                               >  1:179110/1‑74                                                                                                      TTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGAC                                                                                                                                              <  2:1285699/69‑1                                                                                                      TTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGAC                                                                                                                                              >  1:1285699/1‑69                                                                                                               GTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGT                                                                                                                                <  2:830710/74‑1                                                                                                               GTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGT                                                                                                                                >  1:830710/1‑74                                                                                                                                      TGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAA                                                                                                                                           <  1:1014545/40‑1                                                                                                                                      TGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAA                                                                                                                                           >  2:1014545/1‑40                                                                                                                                                      AGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCG             <  1:349740/150‑1                                                                                                                                                        CCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTT           <  2:1344539/150‑1                                                                                                                                                            AGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCC       <  2:1440965/150‑1                                                                                                                                                             GTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCA      <  1:1405582/150‑1                                                                                                                                                                tGATGAGGGACGATCTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCA   <  1:1495218/149‑1                                                                                                                                                                CGATGAGAGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTAATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCA   <  3:138807/150‑1                                                                                                                                                                 GATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATAAATGGTCGCGAATACATTAACTTCGTACAAGTCATTGTCGTTTTCCAGCAt  >  3:418874/1‑149                                                                                                                                                                                                                                                                                                                        ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/2035137‑2035297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCAG  <  NC_000913_3_hsa_tpiA/2035305‑2035157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.