| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 3328172 = | 142 (1.060) | 20 (0.160) | 19/246 | 11.8 | 12.8% | intergenic (+89/+67) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| ? | NC_000913_3_hsa_tpiA | 3328195 = | 140 (1.130) | intergenic (+112/+44) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCTGATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/3328330‑3328172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccttttTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATA > NC_000913_3_hsa_tpiA/3328195‑3328341 gcgggagCGGGAAAGAAGAAGAGGATGTTGGGGTCATCAAAACGCCGGGCGGCGAAGTAGGATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATG < 2:1031736/143‑1 TGATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGG > 2:1451515/1‑150 ATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCC > 1:118944/1‑150 ATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCC < 4:298732/150‑1 GGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT < 4:574396/150‑1 GGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT < 1:190162/150‑1 GCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAGAAGGCCGCTATGCGGCCTTTT < 4:286248/150‑1 GCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT < 1:661118/150‑1 AAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCG < 1:245651/140‑1 AAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCG > 2:245651/1‑140 TGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTT > 4:863680/1‑130 TGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTT < 3:863680/130‑1 GTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGCAATTCTTA > 1:1313378/1‑150 GGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT < 1:980323/79‑1 GGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT > 2:980323/1‑79 CAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTC < 4:511762/61‑1 CAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTC > 3:511762/1‑61 TCAAGATGTTGATGTAATGTAAAGAAAGGACAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGCTTTTTCTTCTATCTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCTTTT > 2:782781/1‑150 TGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGA > 2:1378348/1‑71 TGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGA < 1:1378348/71‑1 TAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATC < 1:782781/150‑1 GAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTT > 3:736201/1‑150 AAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTG > 2:494886/1‑150 AAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCC > 2:563297/1‑150 AAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAA < 2:610240/95‑1 AAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAA > 1:610240/1‑95 AAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAAT > 3:92429/1‑86 AAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAAT < 4:92429/86‑1 AGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGAT > 1:1157965/1‑121 AGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGAT < 2:1157965/121‑1 TATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCC > 2:218871/1‑150 ATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCA < 1:494886/150‑1 GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG < 3:839286/109‑1 GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG > 4:839286/1‑109 CGGCCTTTTTCCTTTCTTTACAATAGAGCAACATCTTGAGAATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTTATGACCACAACATCATCTTCTTCTTTGCCGATCAAGCCgaaa > 2:734768/1‑146 CGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGA < 3:715695/150‑1 CGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGA > 2:1476341/1‑150 CGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGA > 1:713666/1‑150 GCCTTTTTTTTTTTTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGC > 4:196972/1‑150 CCTTTTTCCTTTCTTTACAATACATCAACCTCTTGAGTATTGGGCACTTCTTACAACTATTCCACCTTAACAACTTCACATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATAACGCCccacgca > 2:679521/1‑143 TTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAAT < 2:920245/150‑1 TTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATA < 3:298732/150‑1 GCCTGATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/3328330‑3328172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccttttTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTGATGACCACAACATCATCTTCTTCTTTGCCGATCAGGCCACGAGCAATA > NC_000913_3_hsa_tpiA/3328195‑3328341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |