| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 3386191 = | 151 (1.130) | 19 (0.150) | 16/244 | 13.0 | 12.1% | intergenic (‑62/+30) | yhcO/aaeB | putative barnase inhibitor/p‑hydroxybenzoic acid efflux system component |
| ? | NC_000913_3_hsa_tpiA | 3386218 = | 137 (1.120) | intergenic (‑89/+3) | yhcO/aaeB | putative barnase inhibitor/p‑hydroxybenzoic acid efflux system component | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTGCTGGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/3386350‑3386191‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcggttttGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCAAAGTAC > NC_000913_3_hsa_tpiA/3386218‑3386362 GTTGCTGGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAG < 3:476876/150‑1 GGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGG < 4:221973/150‑1 GGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGG > 1:461850/1‑150 ACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCG > 2:883787/1‑150 TGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTT < 1:883787/150‑1 tTCCATAAGTATCAACATGGGAACCTGGCTAGTTAAGGCAAAACCGCCGCCAAAGGCGTCGGTTTTGACTTAACTATCGGTCAACGGATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGC < 1:324211/149‑1 TCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCT > 2:616529/1‑150 CCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACAGACGCCAACAGCGTCGGTTTTGTCTTAACTATCGGTCAACGCATGTTGCTACTTATGGAGCATCCCCGCCCGCCGATTTACCTGTTCCGTCACCTGCGGTCGCGCTa > 2:324211/1‑149 TATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGAT > 2:860969/1‑150 CAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCG > 3:572634/1‑150 CATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAG < 1:616529/150‑1 AAGTCAAAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCC < 1:860969/150‑1 aacCCGACGCCAACAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTG < 1:142769/110‑1 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGG < 4:782093/135‑1 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGG > 3:782093/1‑135 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTG > 2:142769/1‑113 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCA > 2:1451902/1‑97 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCA < 1:1451902/97‑1 AAACCGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACGTATGTAGCATCTCCGCCAGCCGAGTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCT > 1:902304/1‑150 CGACGCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCA < 4:572634/150‑1 GCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCC < 2:1413719/107‑1 GCCAAAAGCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCC > 1:1413719/1‑107 GCGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCA > 1:1124638/1‑150 CGTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCAA < 1:451283/150‑1 GTCGGTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCAAA < 4:916241/150‑1 GTTTTGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCAAAGTAC < 1:1093139/150‑1 GTTGCTGGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAAGTCAAAACCGACGCCAAAAGCGTCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_tpiA/3386350‑3386191‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtcggttttGACTTAACTATCGGTCAACGCATGTTGATACTTATGGAGCATCCCCGCCAGCCGATTTACCGGTTCCGTCACCTGCGGTGGCGCTTGCCAGATGCGTAGCTTTTCCTGGTAGATTTCCAGTTCTTCCAGCAACTGGCCAAAGTAC > NC_000913_3_hsa_tpiA/3386218‑3386362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |