New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1207790 =17 (0.470)26 (0.810) 23/244 NT 59.8% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA 1209619 = 20 (0.620)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

AGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_tpiA/1207645‑1207937
                                                                                                                                                 |                                                                                                                                                   
atcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgattcgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTgg                                                                                                                                                  <  1:366194‑M1/4‑1 (MQ=255)
  cgcggtggaggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                <  1:219740‑M1/146‑1 (MQ=255)
  cGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGTGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                <  1:89555‑M1/149‑1 (MQ=255)
  cGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                <  1:570844‑M1/149‑1 (MQ=255)
    tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                              <  1:689902‑M1/8‑1 (MQ=255)
     gggggaggCATCCGGGGCCAGCCTGGAGAAGGGGGGGCACGACCAGTTACTTACCGTACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGG                                                                                                                                             <  2:343749‑M1/146‑1 (MQ=255)
      cacagttcagcgcattacgttgtggatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                            >  1:257686‑M1/140‑149 (MQ=255)
          gttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                                                                                        >  2:257935‑M1/136‑149 (MQ=255)
                   gTGCAAGTCCGGCGAAGGGGCGGCACGAGCAGGTACTTACCGCACTTCCCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                               <  1:519502/149‑1 (MQ=17)
                   attacgttgtagatctgtggtctggtcatttgttgatacgggtacatagtcaataagcatgttaaatccccctggtaaaaggcggaatgatgccatttgcttgttatttcttctttttccttaatgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                               >  1:336859‑M1/127‑149 (MQ=255)
                       cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                           <  1:165743‑M1/149‑12 (MQ=255)
                        gttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                          <  1:644007‑M1/28‑1 (MQ=255)
                           cTGGAGAATGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCACAAGAATCAGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGACGGAGCAAAAATCAATgc                                                                                                                       >  2:247406/1‑149 (MQ=18)
                           cTGGAGAAGGGGCGGCACGACCAGTTACGTACCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                       <  2:486105/149‑1 (MQ=255)
                            tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                      <  2:433942‑M1/149‑17 (MQ=255)
                                gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTCAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                  <  1:151862/149‑1 (MQ=255)
                                gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                  <  1:151866/149‑1 (MQ=255)
                                   ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                               <  1:466447‑M1/149‑24 (MQ=255)
                                    tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                              >  1:515909‑M1/110‑149 (MQ=255)
                                      ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctttattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCGACGGCTa                                                                                                            <  1:57845‑M1/42‑1 (MQ=255)
                                        ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGTGCAAAACTCAATGCAGCAACGGCTACa                                                                                                          <  2:464341‑M1/44‑1 (MQ=255)
                                         gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCACATCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctcggcattacctgtcggtgtcccggttc                                                                                                         >  2:603688‑M1/1‑120 (MQ=255)
                                          cACGACTAGTTACTGACCGCACTTCGCGCGCTGCTGTTAAGCCTCAAGAATCCGTTTGGTGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcc                                                                                                        <  2:36474‑M1/149‑31 (MQ=255)
                                           gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                       >  2:479879‑M1/103‑149 (MQ=255)
                                            cggcgaGTTACTTTCGGCATTGCGCGCGCTGTTGTTAAGCAGCAAGGATCGGTTTGGGGATATGAACTCGGATGGCACTGTGCAAACGGCTCTCGAAAAGCTTCGTTTGGGAGAAGGAGGAAAACTCAATGCTGTAACGGCTACATTAg                                                                                                      <  2:623319/144‑1 (MQ=255)
                                            cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCCCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                      <  1:194898/149‑1 (MQ=255)
                                             gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAGATCGGATGGACCTGTGCAAACGGCTCCCGAAAACCTTGGTTTGGGAGAAAGctctgcattacctgttggtgtcccggttcgttg                                                                                                     >  2:20707‑M1/1‑116 (MQ=255)
                                               tttgttgagacgcgtacatagtcaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGctaaattcagaa                                                                                                   >  2:602860‑M1/99‑144 (MQ=255)
                                                   ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCGACGGCTACATTAGGACGCAc                                                                                               >  1:367686/1‑149 (MQ=255)
                                                    tacgtacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAAGCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                              <  2:249220‑M1/149‑41 (MQ=255)
                                                       tacgcctacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                           >  1:590455‑M1/91‑149 (MQ=255)
                                                         cccgtacatagccaataagcattttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                         >  1:223752‑M1/89‑149 (MQ=255)
                                                          gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                        <  1:415908‑M1/62‑1 (MQ=255)
                                                                  agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                                                                                <  1:630183‑M1/70‑1 (MQ=255)
                                                                     caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                             <  1:348668‑M1/73‑1 (MQ=255)
                                                                       gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                           >  1:662979‑M1/1‑90 (MQ=255)
                                                                       cgggctgttaAGCCGAAAGAGTGCGTGTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                           <  2:515287‑M1/146‑60 (MQ=255)
                                                                          agcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                        >  2:286322‑M1/72‑149 (MQ=255)
                                                                              tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCACAACTCAATGCAGCAACGGCTACACTAGGACGCACCGGTTTCATAGCTATCCCGGTTATGAt                                                                    <  2:224969‑M1/82‑1 (MQ=255)
                                                                               tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                   >  1:494677/1‑149 (MQ=255)
                                                                               tAAGCAGCAAAAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                   <  2:380932/149‑1 (MQ=255)
                                                                               gaagCCGGAAGGATCCGTTTGGCGATATCAAATCGGTTGGCACGGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                   <  2:568114‑M1/148‑68 (MQ=255)
                                                                                  aagtccccctggaaacaggaagaatgatgccatttgcctgttatttctccactttcataaacgTTGGTTTGGGAGAAGGAGCCAAACTTAACGAAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGATATGATtggt                                                                >  2:402008‑M1/64‑149 (MQ=255)
                                                                                        ccgtgcgaaaagcaggaatgttgccattttcttgttattttctcattgtcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCGTCGGCTACATTAGGACGGCCCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                          >  2:432423‑M1/58‑149 (MQ=255)
                                                                                        ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                          <  1:469562‑M1/92‑1 (MQ=255)
                                                                                          ctggtaaaagcatgaatgatgccttttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                        >  2:686459‑M1/56‑149 (MQ=255)
                                                                                          ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                        >  1:481801‑M1/56‑149 (MQ=255)
                                                                                           tggtaaaagcaggaatgatgctaattgcttgttatctcttccattccataaacaTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAttgcg                                                       >  1:501987‑M1/55‑147 (MQ=255)
                                                                                                  tgcagatatCAAAGTGCATGGCACGGTGAAAACGACTCTCGAAGACCTTGGTTTGGGAGAAGGctcggcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttt                                                <  2:366531‑M1/145‑87 (MQ=255)
                                                                                                  agaaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGATTGGGCGACGGAGCAAAACTCAATGCAGCAACGGCTACATTGGGACGCACCGGTTTCATAACTATACCGGTTATGATTGGTGGTATtaagcagtcct                                                <  2:676829‑M1/102‑6 (MQ=255)
                                                                                                    gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATCGACGCTGTATTGATGATTGGTGGTATTGAGCAATCAGTa                                              <  1:510937/149‑1 (MQ=37)
                                                                                                      ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                            >  2:665206‑M1/44‑149 (MQ=255)
                                                                                                      ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                            <  1:395218‑M1/106‑1 (MQ=255)
                                                                                                       atctCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                           <  1:55129/146‑1 (MQ=255)
                                                                                                            aaaTCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTGGTGTGGGACAACGAGCACAACTCAATGCAACAACGGCAACATTCGGACGCACACGCTTCACAGCCATACCGGTCCAGATTGGTGGTATCGAGCACTCAATAATCCTTcc                                      >  2:219314/1‑148 (MQ=255)
                                                                                                                  tttgcttgttatttcatcattttcataaacgTGCGTTGGGTCGGTGGTGGATGACGCACTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                >  2:661551‑M1/32‑149 (MQ=255)
                                                                                                                   aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                               >  1:556667/1‑149 (MQ=255)
                                                                                                                     ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                             <  1:58143/149‑1 (MQ=255)
                                                                                                                        aCTGTGCAAACGGCTCTCGAACACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACTCACCGGTTTCATAGCTATAGCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                          <  1:94844/149‑1 (MQ=255)
                                                                                                                        aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatccccggaact                          >  1:303611‑M1/1‑41 (MQ=255)
                                                                                                                         gttatttcttcagtttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGGAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                         >  2:656656‑M1/25‑149 (MQ=255)
                                                                                                                          tgggcaaACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatcacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg                        <  1:113628‑M1/146‑111 (MQ=255)
                                                                                                                                 ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                 <  1:656558‑M1/133‑1 (MQ=255)
                                                                                                                                        tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt          >  2:447541/1‑149 (MQ=255)
                                                                                                                                         cGAAAATCTTGGTTTGGGAGAAGGctctggattacctggtggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga         <  2:278420‑M1/149‑126 (MQ=255)
                                                                                                                                                cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGCATACCGCAAAATCATCTGCCTCTgg  >  2:306595/1‑149 (MQ=255)
                                                                                                                                                cTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg  <  1:247761/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
AGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_tpiA/1207645‑1207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.