BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913_3_hsa_tpiA	389,925	(T)_6→7	intergenic (‑198/‑326)	hemB ← / → yaiT	5‑aminolevulinate dehydratase (porphobilinogen synthase)/pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913_3_hsa_tpiA	389,919	1	.	T	100.0%	340.1 / NA	94	intergenic (‑192/‑332)	hemB/yaiT	5‑aminolevulinate dehydratase (porphobilinogen synthase)/pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (47/47); total (47/47)

Only 100 of 106 total aligned reads displayed.

GCAGGGTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑TTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAATACT  >  NC_000913_3_hsa_tpiA/389773‑390063

gCAGGGTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑ttt                                                                                                                                               >  2:911406/1‑150 (MQ=255)

  aGGGTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑ttttt                                                                                                                                             >  4:238454/1‑150 (MQ=255)

  aGGGTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑ttttt                                                                                                                                             <  1:636971/150‑1 (MQ=255)

    ggTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑ttttttt                                                                                                                                           >  1:393146/1‑149 (MQ=255)

     gTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑tttttttg                                                                                                                                          <  4:226793/150‑3 (MQ=255)

       aGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑tttttttgga                                                                                                                                        <  1:181427/150‑5 (MQ=255)

        gggATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑tttttttggag                                                                                                                                       <  4:164681/150‑6 (MQ=255)

            tGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTg                                                                                                                                    <  3:472586/150‑1 (MQ=255)

             gTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTgg                                                                                                                                   <  2:153736/150‑1 (MQ=255)

             gTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTgg                                                                                                                                   <  1:76552/150‑1 (MQ=255)

              ttttACGAAAGTTGTCGCGATGTTGACAAGAAGAGCATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGt                                                                                                                                  >  4:438329/1‑150 (MQ=255)

               tttACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGtt                                                                                                                                 <  2:391316/150‑1 (MQ=255)

                ttACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTg                                                                                                                                >  2:751326/1‑150 (MQ=255)

                 tACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTgc                                                                                                                               >  1:271668/1‑150 (MQ=255)

                  aCGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCNANGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTgcg                                                                                                                              >  1:374956/1‑150 (MQ=255)

                  aCGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTgcg                                                                                                                              >  2:439147/1‑150 (MQ=255)

                    gAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCgct                                                                                                                            >  3:396579/1‑150 (MQ=255)

                     aaaGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTCTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCgctg                                                                                                                           <  1:791953/150‑1 (MQ=255)

                      aaGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCgctgc                                                                                                                          <  1:391754/150‑1 (MQ=255)

                              gcgATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAAtt                                                                                                                  >  3:384730/1‑150 (MQ=255)

                               cgATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTg                                                                                                                 <  2:153177/150‑1 (MQ=255)

                                      gACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAAtt                                                                                                          >  1:647650/1‑150 (MQ=255)

                                      gACAAGAAGAGAATGAAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAAtt                                                                                                          <  1:22421/150‑1 (MQ=255)

                                              gagaATGGAAGAGAGGCCAGGACATCTTTTTAAAAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACttt                                                                                                  <  2:246342/150‑1 (MQ=255)

                                               agaATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTttg                                                                                                 <  1:664457/150‑1 (MQ=255)

                                                 aaTGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTttgtt                                                                                               >  4:269893/1‑150 (MQ=255)

                                                   tGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGTAGTTTGTTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGc                                                                                             >  2:354215/1‑150 (MQ=255)

                                                   tGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGc                                                                                             >  1:652324/1‑150 (MQ=255)

                                                   tGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGc                                                                                             >  1:920707/1‑150 (MQ=255)

                                                    ggAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCa                                                                                            >  4:362001/1‑150 (MQ=255)

                                                      aaGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGttatta                                                                                                                                                   <  4:131116/93‑1 (MQ=255)

                                                      aaGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGttatta                                                                                                                                                   >  3:131116/1‑93 (MQ=255)

                                                      aaGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTgg                                                                                                                                   <  2:414039/109‑1 (MQ=255)

                                                      aaGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTgg                                                                                                                                   >  1:414039/1‑109 (MQ=255)

                                                      aaGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCGGCTATAAATTGAATAATTAAAACTTTGTTGCata                                                                                          <  1:435911/150‑1 (MQ=255)

                                                       agagagGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCatat                                                                                         <  1:735381/150‑1 (MQ=255)

                                                         ggagGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTc                                                                                       <  2:19628/149‑1 (MQ=255)

                                                             gCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAg                                                                                   >  1:906073/1‑150 (MQ=255)

                                                             gCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAg                                                                                   <  1:483983/150‑1 (MQ=255)

                                                               cAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATAtt                                                                                        <  1:581542/143‑1 (MQ=255)

                                                               cAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATAtt                                                                                        >  2:581542/1‑143 (MQ=255)

                                                                aGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGat                                                                                <  2:920707/150‑1 (MQ=255)

                                                                     aTCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTa                                                                           >  1:946284/1‑150 (MQ=255)

                                                                        tttttAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCt                                                                        >  3:531428/1‑150 (MQ=255)

                                                                        tttttAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCt                                                                        >  3:578157/1‑150 (MQ=255)

                                                                            tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtt                                                                    <  2:946284/150‑1 (MQ=255)

                                                                             aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgttt                                                                   >  1:321777/1‑150 (MQ=255)

                                                                             aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgttt                                                                   <  2:374956/150‑1 (MQ=255)

                                                                             aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgttt                                                                   <  4:562002/150‑1 (MQ=255)

                                                                               tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTgg                                                                      >  3:186922/1‑145 (MQ=255)

                                                                               tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgt                                                                 <  4:531428/150‑1 (MQ=255)

                                                                               tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCGTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgt                                                                 <  4:134399/150‑1 (MQ=255)

                                                                                 gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgtgt                                                               >  3:94711/1‑150 (MQ=255)

                                                                                 gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgtgt                                                               <  4:384730/150‑1 (MQ=255)

                                                                                  aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGaa                                                                                                               <  2:651256/101‑1 (MQ=255)

                                                                                  aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGaa                                                                                                               >  1:651256/1‑101 (MQ=255)

                                                                                  aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgtgtt                                                              <  1:855446/150‑1 (MQ=255)

                                                                                  aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgtgtt                                                              >  4:546873/1‑150 (MQ=255)

                                                                                    aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGgtttgtgtttg                                                            <  1:751326/150‑1 (MQ=255)

                                                                                      aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGtttgtgtttgtg                                                          <  2:393146/150‑1 (MQ=255)

                                                                                      aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGtttgtgtttgtg                                                          >  1:927894/1‑150 (MQ=255)

                                                                                        cAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAAtt                                                                                                                  >  2:379975/1‑92 (MQ=255)

                                                                                        cAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAAtt                                                                                                                  <  1:379975/92‑1 (MQ=255)

                                                                                        cAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGat                                                        <  2:498195/150‑1 (MQ=255)

                                                                                         aataatTTTATATTCACTGAAAATATTTTCAATCTTTATTTATAGCTGTTGGGTATTATTTTTTTGGTGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTTTTGCCTCTTCATAGGATACTTACCTGGttcgttcttgtgtga                                                       >  4:140219/1‑147 (MQ=255)

                                                                                          ataatTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGatat                                                      >  3:25187/1‑150 (MQ=255)

                                                                                                  atatTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATg                                              <  2:271668/150‑1 (MQ=255)

                                                                                                     ttCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGt                                           >  1:246589/1‑150 (MQ=255)

                                                                                                       cACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTAt                                         >  4:174776/1‑150 (MQ=255)

                                                                                                         cTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGATTTTTGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGc                                       >  4:208083/1‑150 (MQ=255)

                                                                                                         cTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGc                                       >  1:883509/1‑150 (MQ=255)

                                                                                                          tGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGat                                                                                >  3:400367/1‑108 (MQ=255)

                                                                                                          tGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGat                                                                                <  4:400367/108‑1 (MQ=255)

                                                                                                          tGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCt                                      >  1:880813/1‑150 (MQ=255)

                                                                                                           gAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCtt                                     <  3:362001/150‑1 (MQ=255)

                                                                                                            aaaaTATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTg                                                                                                                 <  2:104865/73‑1 (MQ=255)

                                                                                                            aaaaTATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTg                                                                                                                 >  1:104865/1‑73 (MQ=255)

                                                                                                             aaaTATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATttatta                                                <  2:38502/137‑1 (MQ=255)

                                                                                                             aaaTATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATttatta                                                >  1:38502/1‑137 (MQ=255)

                                                                                                                 atTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAgg                                                                                  <  2:269711/99‑1 (MQ=255)

                                                                                                                 atTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAgg                                                                                  >  1:269711/1‑99 (MQ=255)

                                                                                                                 atTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCaaaaa                               <  1:893446/150‑1 (MQ=255)

                                                                                                                 atTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCaaaaa                               >  1:371591/1‑150 (MQ=255)

                                                                                                                     ttAATGTTTATTTAGAGCTGATGGTTATTATTTTTTTTGAGTTTGGTTGCTCTGCTATAAATTGAATAATTAAATCTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTCATATTTATTATGCGTATGCTTCAAAAACaaa                           <  4:209221/150‑1 (MQ=255)

                                                                                                                          cTTTATTTATAGCTGTTGGTTATTATTTTTTTTTTTTTTTTTTGCGCTGCTAGAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATTTCGTTTGTGTTTTTTTTATTTATTATGCGTATGTTTCATTATCAAATTTAt                      >  2:588543/1‑150 (MQ=255)

                                                                                                                           tttatttaTAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATc                     <  2:321777/150‑1 (MQ=255)

                                                                                                                            ttatttatAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCt                    <  3:86428/150‑1 (MQ=255)

                                                                                                                            ttatttatAGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCt                    <  3:581151/150‑1 (MQ=255)

                                                                                                                               tatataGCTGTTGGTTATTATTTTTTTGGAGCTTGGTTGCGCAGCTATAAATTGAATAATTAAAACCTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCa                 <  1:354215/148‑1 (MQ=255)

                                                                                                                                 tataGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAAc               >  3:264242/1‑150 (MQ=255)

                                                                                                                                  ataGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCt                    >  3:585405/1‑144 (MQ=255)

                                                                                                                                  ataGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCt                    <  4:585405/144‑1 (MQ=255)

                                                                                                                                  ataGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACa              >  3:433455/1‑150 (MQ=255)

                                                                                                                                   taGCTGTTGGTTATTATTTTTTTGGAGTTTTGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACAt             >  4:556900/1‑150 (MQ=255)

                                                                                                                                   taGCTGTTGGTTATTATTTTTTTGGAGTTTGGTTTCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACAt             <  4:214069/150‑1 (MQ=255)

                                                                                                                                         ttGGTTATTATTTTTTTTTTTTTTTGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGaa       >  2:361080/1‑150 (MQ=255)

                                                                                                                                           ggTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAAt     >  1:710181/1‑150 (MQ=255)

                                                                                                                                            gTTATTATTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTTACTCGTTTGTGCTTGTGTTAAGTATTGTGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAATa    >  1:200739/1‑150 (MQ=255)

                                                                                                                                             ttattatTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAATAc   <  2:906073/150‑1 (MQ=255)

                                                                                                                                              tattatTTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAATACt  <  4:396579/150‑1 (MQ=255)

GCAGGGTAGGGATGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGGAAGAGAGGCCAGGACATCTTTTTAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTA‑TTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTGCAACATGTTGAAATACT  >  NC_000913_3_hsa_tpiA/389773‑390063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`