New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 3121594 =78 (1.380)3 (0.060) 3/264 NT 3.9% intergenic (‑315/+40) glcA/glcB glycolate transporter/malate synthase G
?NC_000913_3_hsa_tpiA 3121622 = 73 (1.360)intergenic (‑343/+12) glcA/glcB glycolate transporter/malate synthase G
Rejected: Frequency below/above cutoff threshold.

CTCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3121748‑3121594
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggctTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCACACGAGTTAGCGAAATTCCCCGCCATCG  >  NC_000913_3_hsa_tpiA/3121622‑3121770
                                                                                                                                                                                                                                                                                                                
CTCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCG                                                                                                                                                            <  3:387172/150‑1
CTCGTGTGCTTGTAAAGCTGCCAGCGATTGAATATGCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGTCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCG                                                                                                                                                            <  2:37017/150‑1
 TCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGG                                                                                                                                                           >  2:275636/1‑150
  CGTGTGCTTTTAAAGCTGCCGGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTATACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGGG                                                                                                                                                          <  2:481040/150‑1
     GTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGGGGCT                                                                                                                                                       <  1:538892/150‑1
                                                               TACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGATTTATTGTCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGT                                                                                             >  2:518581/1‑150
                                                                                                              ATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGCTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCT                                              >  4:359947/1‑150
                                                                                                                           AAAAAGCCCCGGCAAGTTTTATTGTCGGGGCTTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAA                                 <  1:518581/150‑1
                                                                                                                                                          TTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTGAACGCCAGGCGNGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATGAAATCGCTGGCAGCTTTAAAAGCACACGAGTTAGCGAAATTCCCCGCCATCG  >  3:166590/1‑150
                                                                                                                                                          TTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCACACGAGTTAGCGAAATTCCCCGCCATCG  >  1:128888/1‑150
                                                                                                                                                          TTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCACACGAGTTAGCGAAATTCCCCGCCATCG  <  4:334004/150‑1
                                                                                                                                                                                                                                                                                                                
CTCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAATAGCGTCAAAAAAGCCCCGGCAAGTTTTATTGTCGGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3121748‑3121594
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggctTTTTTGACGCTATTAATGACTTTCTTTTTCGCGTAAACGCCAGGCGTGTAATAACGGTTCGGTATAGCCGTTTGGCTGTTTCACGCCGAGGAAGATTAAATCGCTGGCAGCTTTAAAAGCACACGAGTTAGCGAAATTCCCCGCCATCG  >  NC_000913_3_hsa_tpiA/3121622‑3121770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.