New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	1552011 =	37 (0.960)	4 (0.110)	4/272	5.2	10.3%	intergenic (+20/+387)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
	?	NC_000913_3_hsa_tpiA	1552221 =	NA (NA)					intergenic (+230/+177)	fdnI/yddM	formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCG  >  NC_000913_3_hsa_tpiA/1551863‑1552159                                                                                                                                                     |                                                                                                                                                     gTGAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTGTCAGCt                                                                                                                                                      >  1:10493/1‑149 (MQ=255)   gAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGa                                                                                                                                                    >  1:394227/1‑149 (MQ=255)    aaaGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGaa                                                                                                                                                   <  1:392571/149‑1 (MQ=255)        gATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACAATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGGGAAGAAGGGATATAATCTGTTGTGAACTTTAAGCTGAAAATg                                                                                                                                               >  1:126768/1‑149 (MQ=255)            ggtcaaaaGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGACGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGgcgc                                                                                                                                           <  1:13054/145‑1 (MQ=255)                 aaGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGATGTaa                                                                                                                                      >  2:260725/1‑149 (MQ=255)                                  aaggTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCata                                                                                                                     >  2:527386/1‑149 (MQ=255)                                     gTAAGTCGTGGGTGGGCGAAGAAACACCATCCGCGGTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTg                                                                                                                  <  1:208177/149‑1 (MQ=255)                                     atAAGTCGTCGCTGGGCGAAGAAACACCATCCGGGCTGGTATAGTAAAATCAAAAAGGCAGAGACGAAAAAAGAGAGGGAAGAAGGGAAATACTAACTACTGTGCTATAAGCTGAAGAGAGCCATGTAAACTCCGACCGTTTCATATTg                                                                                                                  >  2:574040/2‑149 (MQ=255)                                      tAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCTCTGTAAAAGGCGCCATTTTCATATTGt                                                                                                                 <  2:470504/149‑1 (MQ=255)                                                                cATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                       >  1:557093/1‑149 (MQ=255)                                                                 aTCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGGGGGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTGGTTCATGCggg                                                                                      >  1:144051/1‑149 (MQ=255)                                                                     gcgcTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgc                                                                                  >  2:488256/1‑149 (MQ=255)                                                                       gcTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcgg                                                                                >  2:575957/1‑149 (MQ=255)                                                                        cTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGGGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggc                                                                               <  2:188206/149‑1 (MQ=255)                                                                           gTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATACTCTCATTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCCCCGTGTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcggcggg                                                                            >  1:91552/1‑147 (MQ=37)                                                                                      tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGt                                                                                                                 <  1:518776/101‑1 (MQ=255)                                                                                      tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGt                                                                                                                 >  2:518776/1‑101 (MQ=255)                                                                                                     ggAAAAAAGAGAGTGAAGAGGGTATATAATGTCTTTTGAACTTTAAGCTGAAAATGGGGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCt                                                  <  2:456967/148‑1 (MQ=255)                                                                                                             gagagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa                                                                                                       >  2:202433/1‑88 (MQ=255)                                                                                                             gagagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa                                                                                                       <  1:202433/88‑1 (MQ=255)                                                                                                               gagTGAAGAAGGGATATAACCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCaa                                        <  2:370033/149‑1 (MQ=255)                                                                                                                 gTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATa                                      <  2:552078/149‑1 (MQ=255)                                                                                                                     agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                  >  1:144001/1‑149 (MQ=255)                                                                                                                         gggATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAg                              >  1:632233/1‑149 (MQ=255)                                                                                                                                aaTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                       <  1:460141/149‑1 (MQ=255)                                                                                                                                 ttctcTTTTGAACTTCAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTGTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCCTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgtg                      <  1:265275/148‑1 (MQ=255)                                                                                                                                   ctctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTa                    >  1:495161/1‑149 (MQ=255)                                                                                                                                   ctctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTa                    <  1:173211/149‑1 (MQ=255)                                                                                                                                      ttttGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGc                 >  2:52742/1‑149 (MQ=255)                                                                                                                                       tttGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGcc                <  1:575957/149‑1 (MQ=255)                                                                                                                                        gtaaaaattAAGATTAAAATGGAGCTGTAAAGGGGGCCATATTCATTTTGTAGACAACGTAGGCTTGGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGGAGGCCt               <  2:38022/142‑1 (MQ=11)                                                                                                                                             cTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                       <  1:213510/72‑1 (MQ=255)                                                                                                                                             cTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                       >  2:213510/1‑72 (MQ=255)                                                                                                                                             cTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATaa          <  1:488256/149‑1 (MQ=40)                                                                                                                                                    cTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCt               >  1:194578/1‑137 (MQ=37)                                                                                                                                                    cTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCt               <  2:194578/137‑1 (MQ=35)                                                                                                                                                     tGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg  >  2:268677/1‑149 (MQ=35)                                                                                                                                                     |                                                                                                                                                     GTGAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCG  >  NC_000913_3_hsa_tpiA/1551863‑1552159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.