Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 1,726,201 T→G L60R (CTT→CGT)  nemR → transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA1,726,2010TG96.0% 605.2 / 11.6 174L60R (CTT→CGT) nemRtranscriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated
Reads supporting (aligned to +/- strand):  ref base T (4/3);  new base G (88/78);  total (93/81)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.26e-01

Only 100 of 176 total aligned reads displayed.

ACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACA  >  NC_000913_3_hsa_tpiA/1726055‑1726346
                                                                                                                                                  |                                                                                                                                                 
aCATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGa                                                                                                                                                <  3:218001/150‑1 (MQ=255)
  aTCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGc                                                                                                                                              <  1:1153015/150‑1 (MQ=255)
  aTCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGc                                                                                                                                              >  3:1151485/1‑150 (MQ=255)
    ctcCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGt                                                                                                                                            <  4:1151485/150‑1 (MQ=255)
     tcCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTc                                                                                                                                           <  4:840327/150‑1 (MQ=255)
     tcCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTc                                                                                                                                           >  2:2141311/1‑150 (MQ=255)
       cTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCAt                                                                                                                                         >  4:505813/1‑150 (MQ=255)
          gCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTAc                                                                                                                                      >  2:692590/1‑150 (MQ=255)
           cGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCCAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTGTCGCTCTAAAGAAGCGTTTGGCGTTGCCCTGCGTGAGCGTCATTAcg                                                                                                                                     <  2:1514295/150‑1 (MQ=255)
            gACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTAcgc                                                                                                                                    >  3:284658/1‑150 (MQ=255)
             aCGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGCTGGAGATAAGCGAACTACTAAAACTGGATTTCGGGCCGATACGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTAcgcc                                                                                                                                   <  1:1454461/150‑1 (MQ=255)
                ggCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCa                                                                                                                                <  1:2052180/150‑1 (MQ=255)
                 gCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGa                                                                                                                                                <  4:1144435/133‑1 (MQ=255)
                    aGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATc                                                                                                                            >  2:1914984/1‑150 (MQ=255)
                         cTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAg                                                                                                                       <  1:2039108/150‑1 (MQ=255)
                              ccTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCgact                                                                                                                  >  1:2298563/1‑150 (MQ=255)
                              ccTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCgact                                                                                                                  >  4:1413087/1‑150 (MQ=255)
                               cTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGc                                                                                                                      >  3:56671/1‑145 (MQ=255)
                                tGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCgactga                                                                                                                <  4:683987/150‑1 (MQ=255)
                                  cAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCgactgact                                                                                                              >  4:190308/1‑150 (MQ=255)
                                  cAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCgactgact                                                                                                              <  1:529396/150‑1 (MQ=255)
                                    aCGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGActgactga                                                                                                            <  3:713109/150‑1 (MQ=255)
                                      gTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATGACGCCGCATATCACCAGCGACTGACTGAGt                                                                                                          >  1:1572677/1‑150 (MQ=255)
                                      gTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGt                                                                                                          >  3:1442812/1‑150 (MQ=255)
                                         gATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTtgc                                                                                                       >  2:2029290/1‑150 (MQ=255)
                                         gATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTtgc                                                                                                       >  4:403810/1‑150 (MQ=255)
                                          aTTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTtgct                                                                                                      <  3:621110/150‑1 (MQ=255)
                                            tCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTtgctgc                                                                                                    >  1:549494/1‑150 (MQ=255)
                                             cACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCa                                                                                                   >  2:782265/1‑150 (MQ=255)
                                             cACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCa                                                                                                   <  1:1914984/150‑1 (MQ=255)
                                              aCCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCaa                                                                                                  >  2:1518334/1‑150 (MQ=255)
                                              aCCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCaa                                                                                                  <  1:782265/150‑1 (MQ=255)
                                                cGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATc                                                                                                >  2:491007/1‑150 (MQ=255)
                                                 gggATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATcc                                                                                               <  2:455133/150‑1 (MQ=255)
                                                         gCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAgg                                                                                       >  4:691026/1‑150 (MQ=255)
                                                         gCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAgg                                                                                       >  1:1039115/1‑150 (MQ=255)
                                                           tAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCAc                                                                                                                          <  2:1796311/113‑1 (MQ=255)
                                                           tAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCAc                                                                                                                          >  1:1796311/1‑113 (MQ=255)
                                                            aaGCGAATTACTAGAAACCGGTGAAGAGCCGAACGGGTCCTTCTATCACTACTTTCGCTATAAACAAGCGTTTGGCGTCGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACCGACTGAGTTGCTGCAATCCGGCGAAGGTaa                                                                                    <  4:412134/150‑1 (MQ=255)
                                                            aaGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTaa                                                                                    <  1:2336923/150‑1 (MQ=255)
                                                                      cTAAAACCCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATACCACCAGCGACAGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCCCGAc                                                                          <  1:926695/150‑1 (MQ=255)
                                                                       tAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCAc                                                                                                                          <  2:1181975/101‑1 (MQ=255)
                                                                       tAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCa                                                                                                   >  2:1692829/1‑124 (MQ=255)
                                                                       tAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGAcc                                                                         >  4:648582/1‑150 (MQ=255)
                                                                       tAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGAcc                                                                         >  4:1095207/1‑150 (MQ=255)
                                                                         aaaaCCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGc                                                                       >  1:1644219/1‑150 (MQ=255)
                                                                          aaaCCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCa                                                                      >  2:2006227/1‑150 (MQ=255)
                                                                              cGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGt                                                                                                                                            <  4:574059/76‑1 (MQ=255)
                                                                              cGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACt                                                                  >  2:1810122/1‑150 (MQ=255)
                                                                               gCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTg                                                                 >  3:216290/1‑150 (MQ=255)
                                                                                cTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTgg                                                                >  2:1232919/1‑150 (MQ=255)
                                                                                   aaGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGt                                                                                      <  1:817921/125‑1 (MQ=255)
                                                                                    aGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCg                                                                                           >  3:897529/1‑119 (MQ=255)
                                                                                    aGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCtta                                                            >  1:1192041/1‑150 (MQ=255)
                                                                                     gTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCttat                                                           >  3:1030928/1‑150 (MQ=255)
                                                                                      tGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCttatt                                                          <  2:1192041/150‑1 (MQ=255)
                                                                                        ccGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTAc                                                        <  3:951057/150‑1 (MQ=255)
                                                                                        ccGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTAc                                                        >  1:1011074/1‑150 (MQ=255)
                                                                                         cGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGa                                                                           <  1:1993022/130‑1 (MQ=255)
                                                                                          gAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCa                                                      >  4:1158353/1‑150 (MQ=255)
                                                                                           aaaGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAg                                                     >  1:2366294/1‑150 (MQ=255)
                                                                                           aaaGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGAcc                                                                         >  2:2370047/1‑130 (MQ=255)
                                                                                           aaaGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGAcc                                                                         <  1:2370047/130‑1 (MQ=255)
                                                                                           aaaGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAg                                                     >  4:527394/1‑150 (MQ=255)
                                                                                           aaaGGGTCCGTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAg                                                     <  2:1531596/150‑1 (MQ=255)
                                                                                             aGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCa                                                   >  2:1064958/1‑150 (MQ=255)
                                                                                               ggTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCaaa                                                 <  1:1232919/150‑1 (MQ=255)
                                                                                                  ccTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAacac                                              <  4:1030928/150‑1 (MQ=255)
                                                                                                  ccTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAacac                                              <  1:2006227/150‑1 (MQ=255)
                                                                                                   cTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACt                                             >  3:1172134/1‑150 (MQ=255)
                                                                                                    ttCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGTGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTg                                            >  2:863757/1‑150 (MQ=255)
                                                                                                    ttCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTg                                            >  4:1174796/1‑150 (MQ=255)
                                                                                                    ttCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTg                                            >  2:142607/1‑150 (MQ=255)
                                                                                                        aTCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAg                                                                                        >  1:1881584/1‑102 (MQ=255)
                                                                                                         tCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCt                                                                                                                                                   >  3:1310490/1‑42 (MQ=255)
                                                                                                         tCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCt                                                                                                                                                   <  4:1310490/42‑1 (MQ=255)
                                                                                                            ctactTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGtt                                    >  4:490418/1‑150 (MQ=255)
                                                                                                               ctTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGAcc                                                                         <  4:903112/110‑1 (MQ=255)
                                                                                                               ctTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTg                                 >  4:814864/1‑150 (MQ=255)
                                                                                                                tttCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGc                                >  2:1944819/1‑150 (MQ=255)
                                                                                                                tttCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGc                                <  1:1518334/150‑1 (MQ=255)
                                                                                                                tttCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGc                                >  4:1406511/1‑150 (MQ=255)
                                                                                                                  tCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCa                              >  1:1683952/1‑150 (MQ=255)
                                                                                                                     ctctAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTg                                                                 >  3:1244675/1‑112 (MQ=255)
                                                                                                                      tctAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACAt                          >  1:1901787/1‑150 (MQ=255)
                                                                                                                        tAAAGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCAt                                                                     <  2:1935093/105‑1 (MQ=255)
                                                                                                                         aaaGAAGCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGa                       >  3:900996/1‑150 (MQ=255)
                                                                                                                            gaagCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAAcc                    <  4:216290/150‑1 (MQ=255)
                                                                                                                               gCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCa                                                                      >  1:71630/1‑97 (MQ=255)
                                                                                                                               gCGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCa                                                                      <  2:71630/97‑1 (MQ=255)
                                                                                                                                cGTTTGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCtt                                                             >  3:1143071/1‑105 (MQ=255)
                                                                                                                                  tttGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGt              <  3:868651/150‑1 (MQ=255)
                                                                                                                                    tGGCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGCCTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACGGAACCAGCTTTACCAACATGGAACCATCAGTgg            >  2:912260/1‑150 (MQ=255)
                                                                                                                                      gCGTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGtt          <  3:403810/150‑1 (MQ=255)
                                                                                                                                        gTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGc                                                               >  3:460412/1‑95 (MQ=255)
                                                                                                                                        gTTGCCATGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGc        <  2:1876629/150‑1 (MQ=255)
                                                                                                                                             cATGCGTGAGCGTCATTACGCCGCATATCACCAGCgactgact                                                                                                              >  4:456990/1‑43 (MQ=255)
                                                                                                                                             cATGCGTGAGCGTCATTACGCCGCATATCACCAGCgactgact                                                                                                              <  3:456990/43‑1 (MQ=255)
                                                                                                                                              aTGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACa  <  3:677101/150‑1 (MQ=255)
                                                                                                                                              aTGCGTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTGTTGCCAACATGGAACCATCAGTGGTTGCCTGACa  <  2:301927/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
ACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACA  >  NC_000913_3_hsa_tpiA/1726055‑1726346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: