| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 2035297 | 78 (1.120) | 12 (0.190) | 11/238 | 6.5 | 14.8% | intergenic (+54/‑538) | yedS/hchA | pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone |
| ? | NC_000913_3_hsa_tpiA | = 2035305 | 67 (1.060) | intergenic (+62/‑530) | yedS/hchA | pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/2035137‑2035297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCA < NC_000913_3_hsa_tpiA/2035305‑2035158 ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTA > 1:19077/1‑150ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTA < 2:332130/150‑1 TACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT > 2:500670/1‑150 CAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTC < 4:36209/150‑1 CAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTA > 1:698282/1‑140 CAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTA < 2:698282/140‑1 AAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG > 2:321137/1‑150 GACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTC < 2:415002/150‑1 ACAACNACCATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA < 3:206500/150‑1 TTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGGTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTG < 4:489036/144‑1 TTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTG > 3:489036/1‑144 cgGCTACCGATGATATCGTTGCTGTGGGCTTGGTCTACCAGTGCTAATCAGTCAACGCGCGGGGGCGTGTTACTGTAAAACTGAACACAGGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCA < 2:800271/148‑1 ATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGTGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACACCGCAGCGAGTTGACTG < 1:575638/150‑1 TTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA < 4:198625/99‑1 TTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA > 3:198625/1‑99 AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAG > 1:357760/1‑87 AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAG < 2:357760/87‑1 AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAG < 3:131090/60‑1 AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAG > 4:131090/1‑60 AGTCACCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGT < 1:762527/75‑1 AGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGT > 2:762527/1‑75 GCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGT < 3:308928/150‑1 GCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGT > 1:321137/1‑150 GAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACT < 1:265110/67‑1 GAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACT > 2:265110/1‑67 AGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGGCGTTGTCC > 1:47936/1‑150 TTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGC > 1:17670/1‑55 TTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGC < 2:17670/55‑1 CGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCA < 3:340534/150‑1 GATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGC < 3:300332/83‑1 GATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGC > 4:300332/1‑83 ATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/2035137‑2035297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAGCA < NC_000913_3_hsa_tpiA/2035305‑2035158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |