Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 4,111,506 T→G intergenic (+821/+91) cdh → / ← yiiQ CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,111,5060TG98.0% 350.3 / ‑2.4 101intergenic (+821/+91)cdh/yiiQCDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base G (44/55);  total (45/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01

Only 100 of 101 total aligned reads displayed.

CACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAG  >  NC_000913_3_hsa_tpiA/4111363‑4111652
                                                                                                                                               |                                                                                                                                                  
cacaAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGc                                                                                                                                              >  2:764393/1‑150 (MQ=255)
 acaAACCACCTCGGTGTTGGCCGGCACCATGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAACTTCCCCCAACGAAGAACTTCCTGTAGGGCGCCATTTTAATTCTCCACGCTGATAAGCg                                                                                                                                             >  2:443578/1‑150 (MQ=255)
  caAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGa                                                                                                                                            <  1:1178973/150‑1 (MQ=255)
   aaaCCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGaa                                                                                                                                           >  1:288611/1‑150 (MQ=255)
     accaccTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATa                                                                                                                                         >  3:351514/1‑150 (MQ=255)
         ccTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAgg                                                                                                                                     <  2:1087173/150‑1 (MQ=255)
               tgtCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATg                                                                                                                               <  2:1150737/150‑1 (MQ=255)
                     ccggcACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGgccgcc                                                                                                                         <  1:312127/150‑1 (MQ=255)
                     ccggcACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGgccgcc                                                                                                                         >  1:44642/1‑150 (MQ=255)
                          gccgtGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTCCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAGTTCTCCGCGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCa                                                                                                                    <  4:410909/146‑1 (MQ=255)
                          aCCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCa                                                                                                                    <  1:559363/150‑1 (MQ=255)
                                gCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCCGCGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcag                                                                                                              <  2:320380/150‑1 (MQ=255)
                                 ccGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                                             <  1:336485/150‑1 (MQ=255)
                                 ccGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                                             >  2:928066/1‑150 (MQ=255)
                                 cagcgTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                                             <  3:526544/148‑1 (MQ=255)
                                   gcgTTCAGAGTGCAAACGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGcagcag                                                                                                           <  2:1116658/150‑1 (MQ=255)
                                        cAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtg                                                                                                      >  2:531492/1‑150 (MQ=255)
                                          gagTGCCGATGATCTTCCCCAGACTCTGCTGCCGTCCGTTCATCTTCCAGTTTCACCCATCGATGACCTGCCTTGAGGCAGCAACTTTAGTTCTCAACGCTGATAAGCGAATAAAGGGAGATGGCCGCCCCGCAGGGCAGCAGGTCtggg                                                                                                    >  2:898195/1‑148 (MQ=255)
                                          gagTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgtg                                                                                                    <  4:322125/150‑1 (MQ=255)
                                           agTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGa                                                                                                   >  1:117416/1‑150 (MQ=255)
                                             ggCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGaaa                                                                                                 <  4:182115/149‑1 (MQ=255)
                                              gCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCg                                                                                                                      <  1:785479/128‑1 (MQ=255)
                                              gCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTGCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCg                                                                                                                      >  2:785479/1‑128 (MQ=255)
                                               ccGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                                               <  3:475894/150‑1 (MQ=255)
                                               ccGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                                               >  3:619234/1‑150 (MQ=255)
                                               ccGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACa                                                                                               <  3:410481/150‑1 (MQ=255)
                                                   tGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGtat                                                                                           <  1:928066/150‑1 (MQ=255)
                                                     aGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATag                                                                                         <  1:310467/150‑1 (MQ=255)
                                                         cccccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGAt                                                                                     <  1:651694/150‑1 (MQ=255)
                                                          ccccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGAtt                                                                                    >  1:731107/1‑150 (MQ=255)
                                                           cccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGcagcag                                                                                                           >  1:61760/1‑126 (MQ=255)
                                                           cccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGcagcag                                                                                                           <  2:61760/126‑1 (MQ=255)
                                                            ccAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCa                                                                                  >  2:972314/1‑150 (MQ=255)
                                                             cAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCAt                                                                                 <  2:859157/150‑1 (MQ=255)
                                                                  tctGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGca                                                                            <  1:985841/150‑1 (MQ=255)
                                                                    tGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGGCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     <  4:710890/123‑1 (MQ=255)
                                                                    tGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     >  3:710890/1‑123 (MQ=255)
                                                                    tGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGcaca                                                                          >  4:331947/1‑150 (MQ=255)
                                                                       ttCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATACGCGAATAAAGGAAGATGGCCGCCCCGCAgg                                                                                                                  <  2:341333/107‑1 (MQ=255)
                                                                       ttCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCACCGCAgg                                                                                                                  >  1:341333/1‑107 (MQ=255)
                                                                          cGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgct                                                                    >  2:1088646/1‑150 (MQ=255)
                                                                            cccGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                                                  >  1:317943/1‑150 (MQ=255)
                                                                             ccGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGCTTCATCGGCACAAAGgctttg                                                                 >  1:10428/1‑150 (MQ=255)
                                                                              cGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgctttgc                                                                <  4:351514/150‑1 (MQ=255)
                                                                                 tCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgctttgcttt                                                             <  3:331947/150‑1 (MQ=255)
                                                                                   aTCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATCTGGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCttttt                                                           <  3:353264/150‑1 (MQ=255)
                                                                                     cTTCCAGTTTCCCCCAACGAAGAACTTCCCGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGt                                                         <  1:517918/150‑1 (MQ=255)
                                                                                       tCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAg                                                                       >  1:373914/1‑134 (MQ=255)
                                                                                       tCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAg                                                                       <  2:373914/134‑1 (MQ=255)
                                                                                        ccAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     <  4:621447/103‑1 (MQ=255)
                                                                                        ccAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     >  3:621447/1‑103 (MQ=255)
                                                                                         cAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCAtt                                                     >  2:557081/1‑150 (MQ=255)
                                                                                          aGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCAttt                                                    <  1:972314/150‑1 (MQ=255)
                                                                                          aGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCAttt                                                    <  2:928815/150‑1 (MQ=255)
                                                                                           gTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTa                                                   >  2:26461/1‑150 (MQ=255)
                                                                                            tttCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                                                  <  1:373576/134‑1 (MQ=255)
                                                                                            tttCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                                                  >  2:373576/1‑134 (MQ=255)
                                                                                             ttCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTAtt                                                 <  2:442634/150‑1 (MQ=255)
                                                                                             ttCCCCCAACGAAGAACGTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGAGAAGCGGATAAAGGAAGACGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCGTTGCTTTTTGTCATTTAtt                                                 <  2:442642/150‑1 (MQ=255)
                                                                                                ccccAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                                                  >  3:158880/1‑130 (MQ=255)
                                                                                                ccccAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGgcttt                                                                  <  4:158880/130‑1 (MQ=255)
                                                                                                 cccAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCGACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCaaa                                             >  4:33033/1‑150 (MQ=255)
                                                                                                 cccAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACGAAGGCTTTGCTTTTTGTCATTTATTCaaa                                             >  2:83655/1‑150 (MQ=255)
                                                                                                  ccAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACGAAGGCTTTGCTTTTTGTCATTTATTCAAAc                                            <  1:83655/150‑1 (MQ=255)
                                                                                                   cAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATg                                                                                                                               <  1:666696/66‑1 (MQ=255)
                                                                                                   cAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATg                                                                                                                               >  2:666696/1‑66 (MQ=255)
                                                                                                   cAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAAcc                                           >  4:107463/1‑150 (MQ=255)
                                                                                                       gaagaaCTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCa                                       >  2:1097858/1‑150 (MQ=255)
                                                                                                         agaaCTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAg                                     <  3:107463/150‑1 (MQ=255)
                                                                                                          gaaCTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGc                                    >  2:542163/1‑150 (MQ=255)
                                                                                                          gaaCTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTACTTTTTGTCATTTATTCaaa                                             >  2:99231/1‑141 (MQ=255)
                                                                                                          gaaCTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTACTTTTTGTCATTTATTCaaa                                             <  1:99231/141‑1 (MQ=255)
                                                                                                             cTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATTGGCACAAAGGCTTTGCTTTTTGTCATTTGTTCAAACCTTCAAGCGAt                                 <  2:731107/150‑1 (MQ=255)
                                                                                                             cTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGAt                                 <  2:44642/150‑1 (MQ=255)
                                                                                                             cTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGAt                                 >  1:194994/1‑150 (MQ=255)
                                                                                                             cTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGAt                                 >  1:341735/1‑150 (MQ=255)
                                                                                                              ttCCTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGAtt                                <  4:550454/150‑1 (MQ=255)
                                                                                                                ccTGGAGGGCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCa                              <  2:341735/150‑1 (MQ=255)
                                                                                                                       ggCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAgcg                       <  1:1144107/150‑1 (MQ=255)
                                                                                                                       ggCGCCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAgcg                       <  1:542163/150‑1 (MQ=255)
                                                                                                                         cgcCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTc                                                        >  2:283399/1‑115 (MQ=255)
                                                                                                                         cgcCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTc                                                        <  1:283399/115‑1 (MQ=255)
                                                                                                                          gcCATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCa                    <  2:10428/150‑1 (MQ=255)
                                                                                                                           ccATTTTAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAg                   <  4:619234/150‑1 (MQ=255)
                                                                                                                           ccATTTTAATTCTCCACGCGGATAAGCGGATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTGTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAg                   <  2:288611/150‑1 (MQ=255)
                                                                                                                               tttAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTa               >  3:340763/1‑150 (MQ=255)
                                                                                                                               tttAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTa               >  1:542193/1‑150 (MQ=255)
                                                                                                                                 tAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCttttt                                                           <  1:706400/104‑1 (MQ=255)
                                                                                                                                 tAATTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCttttt                                                           >  2:706400/1‑104 (MQ=255)
                                                                                                                                   aTTCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCg           <  3:489175/150‑1 (MQ=255)
                                                                                                                                    ttCTCCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCgg          <  2:413801/150‑1 (MQ=255)
                                                                                                                                    ttCTCCACCCTGCTAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCgg          <  2:587096/150‑1 (MQ=255)
                                                                                                                                      ctcCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     >  3:599366/1‑57 (MQ=255)
                                                                                                                                      ctcCACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCtgt                                                                                                     <  4:599366/57‑1 (MQ=255)
                                                                                                                                         cACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCaa     >  4:159496/1‑150 (MQ=255)
                                                                                                                                         cACGCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCaa     <  1:540370/150‑1 (MQ=255)
                                                                                                                                            gCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                                             >  4:61710/1‑43 (MQ=255)
                                                                                                                                            gCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGgcagc                                                                                                             <  3:61710/43‑1 (MQ=255)
                                                                                                                                            gCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAg  >  2:987569/1‑150 (MQ=255)
                                                                                                                                            gCTGATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAg  >  2:987589/1‑150 (MQ=255)
                                                                                                                                               |                                                                                                                                                  
CACAAACCACCTCGGTGTCGGCCGGCACCTTGGCCGCGTTCAGAGTGCCGATGAGCTCCCCCAGACTCTGCTTCCGCCCGTTCATCTTCCAGTTTCCCCCAACGAAGAACTTCCTGGAGGGCGCCATTTTAATTCTCCACGCTTATAAGCGAATAAAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAG  >  NC_000913_3_hsa_tpiA/4111363‑4111652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: