Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,287,2680CA26.9% 126.6 / 10.4 80noncoding (61/85 nt)tyrVtRNA‑Tyr
Reads supporting (aligned to +/- strand):  ref base C (29/28);  new base A (21/0);  total (51/29)
Fisher's exact test for biased strand distribution p-value = 2.50e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTG  >  NC_000913/1287121‑1287416
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cTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCt                                                                                                                                                     >  1:657021/1‑149 (MQ=255)
  gCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTc                                                                                                                                                   <  1:238767/149‑1 (MQ=255)
  gCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTc                                                                                                                                                   <  1:981994/149‑1 (MQ=255)
  gCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACtttg                                                                                                                                                   >  1:857984/1‑148 (MQ=255)
     gCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                                                                >  2:586213/1‑149 (MQ=255)
     gCAACGCTCTCTCGCTGCCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                                                                <  1:342501/149‑1 (MQ=255)
       aaCGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCAGCATGGGCAGATTATTTAATTGCGGATTCGTTGGGAATTTCAAGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCCAACCTTCGAAGt                                                                                                                                              >  1:1459277/1‑149 (MQ=18)
          gCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACAATCGAAGTGGa                                                                                                                                           >  1:1150621/1‑149 (MQ=255)
               ctcGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACGATTCTAAGTCGATGACg                                                                                                                                      >  1:314375/1‑149 (MQ=255)
                  gCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                                                                   >  1:1648480/1‑149 (MQ=255)
                    tGGCGCTCGAGTCGACCCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTAAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGCCGGCAGa                                                                                                                                 >  2:1533348/1‑149 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGTAGGATTCGAACCTTCGAAGTCGAt                                                                                                                                          <  1:437581/140‑1 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGAt                                                                                                                                          >  2:437581/1‑140 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGAt                                                                                                                                          >  2:796384/1‑140 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGAt                                                                                                                                          <  1:796384/140‑1 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGa                                                                                                                                 >  2:703184/1‑149 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGa                                                                                                                                 >  1:413870/1‑149 (MQ=255)
                    tGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATACGAACCTTCGAAGTCGATGACgtaaaa                                                                                                                                 >  2:858682/1‑144 (MQ=255)
                      gcgcTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAATTAATTGCGGATTCGTTTGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACATTCTACGTCGATGACggataatt                                                                                                                               >  2:1125568/1‑143 (MQ=17)
                        gcTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTAGATGACGGCAGATTTa                                                                                                                             >  1:568319/1‑149 (MQ=255)
                            gAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTAGAAGTAGATGACGGCAGATTTACAgg                                                                                                                         >  1:496756/1‑148 (MQ=255)
                              gTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTAACCTGCGAAGTCGATGACGGAAGATTGACAGTCt                                                                                                                       >  1:743436/1‑149 (MQ=255)
                               tCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                                      <  2:1648480/149‑1 (MQ=255)
                                          tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTAACATTCGAAGTCGATGACGGCAGATTTACTGTCTGCTCGCTTTggg                                                                                                           >  2:26632/1‑148 (MQ=255)
                                          tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                                                                           >  1:997079/1‑149 (MQ=255)
                                          tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACATTCGAAGGCGATGACGGCAGATTTACAGTCTGCTCCCTATGGc                                                                                                           >  2:1303891/1‑149 (MQ=255)
                                           cGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGcc                                                                                                          <  2:1217944/149‑1 (MQ=255)
                                           cGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAACAATCTAAGAAGATGACCCAAGATTTAGAGTCTGCTCCAATTggac                                                                                                          >  2:182554/1‑147 (MQ=17)
                                               gCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACATTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGTCCGCTc                                                                                                      >  1:1591558/1‑149 (MQ=255)
                                               gCTTATAATCCTTCACCGCATCGGTAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGGGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                                                                      <  2:1459277/149‑1 (MQ=25)
                                                cTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCg                                                                                                     <  1:518794/149‑1 (MQ=255)
                                                 ttCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCgg                                                                                                    <  1:995525/149‑1 (MQ=255)
                                                 ttCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATAACAATCGAACTCAATGCCTCCAGATTTAAATTCTTCTACCATTGGCAGCTCgt                                                                                                    >  2:683814/1‑148 (MQ=17)
                                                    tcATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGCTTCGGGGGGAAGTTCAGTGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCAGGaa                                                                                                 <  2:1249983/149‑1 (MQ=25)
                                                     cATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTGGGGAAGTTCCGGGACTTTTGAAAGTGATGGGGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                                                <  1:1058243/149‑1 (MQ=255)
                                                      aTCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTACCATTCGAAGTAGATGACGGAAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                                               >  2:193436/1‑149 (MQ=25)
                                                      aTCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACATTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTAGGACGCTCGGGAAcc                                                                                               >  1:274803/1‑149 (MQ=255)
                                                      aTCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACATTCGAAGTCGATGACGGCAGATTTACAGTCTGCACCCTTTGGCCGCTCGGGAAcc                                                                                               >  2:496083/1‑149 (MQ=255)
                                                       tCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACATTCGAAGTCGATGACGGCATATTTACTGTCTGCTCCCTTTGGCCGCTCGGGAAcca                                                                                              >  1:581515/1‑148 (MQ=255)
                                                       tCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATACCAAGCTAAGAAGATCACGCCACATGTACAGTCACCTCCCAAAGGCCGCTCGGGAAccc                                                                                              >  2:855314/1‑149 (MQ=14)
                                                          ttCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccac                                                                                           <  1:586213/149‑1 (MQ=255)
                                                            ccccGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTACCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTAGGACGCTCGGGAACCccccca                                                                                         >  2:551610/1‑149 (MQ=25)
                                                               cGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAggg                                                                                      >  1:480730/1‑149 (MQ=255)
                                                               cGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATTACAGTCGAAGGGGATCACCGCTCAGTGCCAGTCTGGTCCCATAGGCCGCTCGGGATCCccaccatcg                                                                                      >  2:138205/1‑146 (MQ=17)
                                                                gCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAgggg                                                                                     <  2:420977/149‑1 (MQ=255)
                                                                     ggCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTATAACATTCTAAGTCGATGACGCCACATTAACAGTCTGCTACCTTTGGACCCACGGGAACCCCACAAGGGGTAAtt                                                                                >  2:1243475/1‑149 (MQ=21)
                                                                       cAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGACGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCCCCAGGGGTAATTCa                                                                              >  1:170650/1‑149 (MQ=255)
                                                                           atatTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAtt                                                                          >  1:1434742/1‑149 (MQ=255)
                                                                              tttAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGAGGGTGGGGGGGGAAGGATTCGAACCTTCGAAGTCGTTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTg                                                                       <  1:949846/149‑1 (MQ=255)
                                                                               ttAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGa                                                                      <  2:267528/149‑1 (MQ=255)
                                                                                       ggATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACAATCTAAGTCGATGACGGCATATTTACAGTCTGCTCACTTTGGCCTCTCGGCAACCCAACCAGGGTTATATCAAATTTTGAGTTAAtta                                                              >  1:878968/1‑147 (MQ=21)
                                                                                         aTTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                                                            <  2:997079/149‑1 (MQ=255)
                                                                                           tCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTga                                                          <  1:703184/149‑1 (MQ=255)
                                                                                              ttGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCTAACGTTCGAAGTAGATGACGGAACATTAACAGTCTGCTCCCTTTGGCCGCGCGGGAACCACACCAGGGGTAAGTCAAAGTTTGCGGTAAGGCTTGAGAt                                                       >  1:1212349/1‑149 (MQ=21)
                                                                                               tGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCATCGAAGACGATCACGCAACATTTACAGTCAGCTCCCTTAGGACTCTCGGGAACCCCACCATGGGTAATTAAATTTTTGATGAAAACCTTTAGAtg                                                      >  1:161385/1‑149 (MQ=18)
                                                                                                 ggAAGTTCAGGGACTTTTGGAAGTGATGGTGGTGGGGGAAGGATTCTAACATTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGATGTAATGATTGAGAtggt                                                    >  1:1635218/1‑149 (MQ=21)
                                                                                                 ggAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGACCATTCGAAGTCGATCACGGCAGAGTTACAGTCTGCTCCCGTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTTATGGTTGAGAtggt                                                    >  2:737769/1‑149 (MQ=21)
                                                                                                   aaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACATTCGAAGTCGATGACGGCAGAGTTACAGTCTGCTCCCTTAGGCCGCTCGGGAACGCCACCCGGGGTAATTAAACTTTTGAGGTAATGCTGGCGCtggtgg                                                  >  1:887506/1‑149 (MQ=18)
                                                                                                    aGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt                                                 <  2:480730/149‑1 (MQ=255)
                                                                                                       tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                                                                >  1:1115185/1‑51 (MQ=255)
                                                                                                       tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGaa                                                                                                                                                <  2:1115185/51‑1 (MQ=255)
                                                                                                            gccTTTTGAAAGTGATGGTGGGGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGCCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                         <  1:1577221/147‑1 (MQ=255)
                                                                                                            gACTTTTGATAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                         <  1:1594562/149‑1 (MQ=255)
                                                                                                            gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                         <  1:858682/149‑1 (MQ=255)
                                                                                                            gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAg                                         <  1:1533348/149‑1 (MQ=255)
                                                                                                               ttttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGACTCTCGGGAACCCCACCATGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGat                                      >  1:57287/1‑149 (MQ=255)
                                                                                                               ttttGAAAGTGATGGTGGTGGGGAAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGat                                      >  2:735561/1‑149 (MQ=255)
                                                                                                               ttctgtcaGTGAGGGTGGGGTGTCAAGGTTTCGATCGTGCGAAGGCGTTGACGTCAGTTTTACAGTCTGCTCCCTTTGGCCGCTCGTTAACCCCCCCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGat                                      <  1:255825/142‑1 (MQ=21)
                                                                                                                tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGACGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGatt                                     >  1:719350/1‑149 (MQ=255)
                                                                                                                 ttGCAAGTGATGGTTGGGGGGGAAGGATTCGATCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGTGAACCCCACCAGGGGTAATTCAATTTTTGATGTAATGCTAGAGATGGTGGGGGGGGAAGGatta                                    <  1:347047/149‑1 (MQ=18)
                                                                                                                 ttGAAAGTGATGGTGGTGGGGGAAGGATTCGACCATTCGAAGTCGATGACGGCAGATTTACAGTCTGCTGCCTTTGTCCTCTCGGGATCCCCACAAGGGGTAATTAATATTTTGATGTAATGCTTGAGATGGTGGTGGGGGAAGGatta                                    >  1:848539/1‑149 (MQ=21)
                                                                                                                       gTGATGGTGGTGGGGGAAGGATTCGTACCTTCGTTGTCGATGACGGCAGTTTTACAGTATGCTCCCTTTGGCCGCTCGTGTACCCCACGATGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATtcgtc                              <  1:683814/149‑1 (MQ=25)
                                                                                                                        tGATGGTGGTGGGGGAAGGATTCTAACATTCTAAGTCGCTCACGGCTGAGTTACAGTCTGCTCCCATTGGACGCTCGCGAACCCCCCCAGGGGTAATTAAAATTTTGAGGTAAAGCTTGACAGTGGGGTGGGGGAAGTTTTATtcgtcg                             >  2:797598/1‑149 (MQ=18)
                                                                                                                                gtggGGAAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGctc                     <  1:735561/149‑1 (MQ=255)
                                                                                                                                     ggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAc                >  2:549254/1‑149 (MQ=255)
                                                                                                                                     ggAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAc                >  2:928936/1‑149 (MQ=255)
                                                                                                                                       aaGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAccc              >  1:441813/1‑149 (MQ=255)
                                                                                                                                        aGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCt             >  1:799605/1‑149 (MQ=255)
                                                                                                                                           aTTCGAACCTGCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGTTAACCCCACCAGGGGTAATTCATATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCg          <  1:182554/149‑1 (MQ=255)
                                                                                                                                                aaCCTTCGAAGTCGATGACGGCAGATTTACAGTCTACTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCg     >  1:605668/1‑149 (MQ=255)
                                                                                                                                                 cccTTCGAAGTCGATGTCGGCAGATTTACAGTCTGCTCACATTGGCCGCTCTGGATCCCCAAGATGGGTAATTAAAATTATGAGGTAATGCTTGAGATGGTGGGGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGt    <  2:878968/148‑1 (MQ=37)
                                                                                                                                                 aCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGt    >  1:130734/1‑149 (MQ=255)
                                                                                                                                                   cTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTg  >  1:1036262/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTG  >  NC_000913/1287121‑1287416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: