New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 338518464 (1.320)5 (0.110) 5/280 6.4 7.4% intergenic (+11/‑354) argR/yhcN l‑arginine‑responsive arginine metabolism regulon transcriptional regulator/cadmium and peroxide resistance protein, stress‑induced
?NC_000913_3_pae_tpiA = 3385197 64 (1.370)intergenic (+24/‑341) argR/yhcN l‑arginine‑responsive arginine metabolism regulon transcriptional regulator/cadmium and peroxide resistance protein, stress‑induced
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCTGCTGGACTCACTGGGCAAAGCAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/3385032‑3385184
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgCCGTCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTTTG  <  NC_000913_3_pae_tpiA/3385197‑3385050
                                                                                                                                                                                                                                                                                                             
CCTGCTGGACTCACTGGGCAAAGAAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGC                                                                                                                                                          <  1:503800/149‑1
                          AAGGTATTCTGGGCACTATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCGCCGTCAGAAACGACGGGGGAGA                                                                                                                                <  2:435370/149‑1
                                                       GACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCGCCGTCAGAAACGACGGGG                                                                                                                                    <  1:355234/116‑1
                                                       GACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCGCCGTCAGAAACGACGGGG                                                                                                                                    >  2:355234/1‑116
                                                                           TGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCGCCGTCAGAAACGACGGGGCAGAGATTAAA                                                                                                                         >  1:636685/1‑107
                                                                           TGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCGCCGTCAGAAACGACGGGGCAGAGATTAAA                                                                                                                         <  2:636685/107‑1
                                                                                                                                                      CCGGCGTCAGAGAAGACGGGGCAGGGATTAAAGCTCCTGGTCGAACAGCTCTAAAGTCGGTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTT    <  2:219911/149‑1
                                                                                                                                                      CCGCCGTCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCAGCGCCAGCGATGGTGCCCAGAATACCTTCTcttt    >  2:125585/1‑145
                                                                                                                                                      CCGCCGTCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCATTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTT    >  1:341001/1‑149
                                                                                                                                                       CGCCGTCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTTT   >  2:713182/1‑149
                                                                                                                                                        GCCGGCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTTTG  <  1:118350/149‑1
                                                                                                                                                                                                                                                                                                             
CCTGCTGGACTCACTGGGCAAAGCAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAATCTCTGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/3385032‑3385184
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgCCGTCAGAAACGACGGGGCAGAGATTAAAGCTCCTGGTCGAACAGCTCTAAAATCGCTTCGTACAGGTCTTTGACTGTGAAACCGTTAGCAGGGGTGGTAAAGATGGTGTCATCGCCAGCGATGGTGCCCAGAATACCTTCTGCTTTG  <  NC_000913_3_pae_tpiA/3385197‑3385050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.