New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 398661466 (1.360)4 (0.090) 4/268 6.7 6.2% noncoding (183/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
?NC_000913_3_pae_tpiA = 3986622 60 (1.340)noncoding (191/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCCTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCA  >  NC_000913_3_pae_tpiA/3986467‑3986762
                                                                                                                                                   |                                                                                                                                                    
tGCCTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTcc                                                                                                                                                     >  2:242551/1‑149 (MQ=255)
     gagaaaCTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACTTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaat                                                                                                                                                <  2:636854/146‑1 (MQ=255)
     cATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaat                                                                                                                                                <  1:94795/149‑1 (MQ=255)
      aTAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaata                                                                                                                                               <  1:252320/149‑1 (MQ=255)
      aTAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATACCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaaga                                                                                                                                               >  1:740271/1‑147 (MQ=255)
              cGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGAAgg                                                                                                                                       >  1:306448/1‑149 (MQ=255)
                gAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCg                                                                                                                                     >  1:95144/1‑149 (MQ=255)
                  aTGACGAAGGGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGtt                                                                                                                                   <  1:695377/149‑1 (MQ=255)
                       gCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCAACAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTATTGTCATACATACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGatctttt                                                                                                                              >  1:555789/1‑149 (MQ=255)
                         agagCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTAt                                                                                                                            <  1:39433/149‑1 (MQ=255)
                          gagCCGTTTACGGTGCTTATCGTCCACTATGAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATg                                                                                                                           >  2:610773/1‑149 (MQ=255)
                             ccGTTTACGGTGCTTATCGTCCACTGCCAGATGTCGCTTATGCCTCATGAGAAACCATGCATACATCATTGCGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGATTTTTTGTCTAt                                                                                                                        >  2:96632/1‑149 (MQ=255)
                             ccGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTAt                                                                                                                        <  1:357069/149‑1 (MQ=255)
                             ccGTTTACGGTGCTTATCGTCAACGTACACATGTTGCTTATACCCCATAAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTGTTACGCCTGCCCCGTAATAAGAGCAGGCCTTTTTTTATGTAt                                                                                                                        <  2:748718/149‑1 (MQ=255)
                               gTTTAGGGTGCTTATCGTCCACTGACAGATGTCGATTATGCTTCATCAGACACCAGGGACACAACGTTGAGTGAAGCACCCACTTGTTGTAATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCa                                                                                                                      <  2:793561/149‑1 (MQ=255)
                                   aCGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGaa                                                                                                                  <  1:639465/149‑1 (MQ=255)
                                     ggTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGGAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAgt                                                                                                                >  1:249011/1‑148 (MQ=255)
                                      gTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAgca                                                                                                               >  2:412033/1‑147 (MQ=255)
                                        gCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGccc                                                                                                             <  1:296617/149‑1 (MQ=255)
                                             tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCCCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                        >  2:488044/1‑149 (MQ=255)
                                             tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATTTATCTGTAGCGCCCCGGAg                                                                                                        >  2:686246/1‑149 (MQ=255)
                                             tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                        >  1:64607/1‑149 (MQ=255)
                                             tCGTCCACTGACAGACGTCGCTTATGCCTCAGCAGACACCATGGACACATCGTTGAGTAAAGCACCCACTTGTTGTCATACAGACCTTTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                        <  1:195450/149‑1 (MQ=255)
                                              cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                       <  1:190351/149‑1 (MQ=255)
                                              cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                       <  1:117167/149‑1 (MQ=255)
                                              cGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGAATGGATTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAgg                                                                                                       >  1:835874/1‑149 (MQ=255)
                                                   aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                  <  1:484998/149‑1 (MQ=255)
                                                   aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                  <  1:316360/149‑1 (MQ=255)
                                                    cTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTg                                                                                                 >  1:473433/1‑149 (MQ=255)
                                                        cAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                        <  2:779968/138‑1 (MQ=255)
                                                        cAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                        >  1:779968/1‑138 (MQ=255)
                                                          gATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATACGAGCAGGCGGTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCg                                                                                           >  1:22065/1‑149 (MQ=255)
                                                            tGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCggg                                                                                         >  2:30355/1‑149 (MQ=255)
                                                             gTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCgggg                                                                                        >  1:34536/1‑148 (MQ=255)
                                                             gTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTGTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGt                                                                                        >  2:633073/1‑149 (MQ=255)
                                                              tCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCGTGCCTCCGGGTg                                                                                       >  1:218715/1‑149 (MQ=255)
                                                                 cTTATGCCTCATCTGACGCCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTgaga                                                                                    <  1:827920/149‑1 (MQ=255)
                                                                  ttATGCCTCATCAGACACCATGGACACAACGTTGAGAGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGGGCAGGCGTTTTTTTATGTATCAGGCAGGCCCCGGAGATTCTTTCCTACGGGAGAGaa                                                                                   >  1:333253/1‑149 (MQ=255)
                                                                  gtATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTCGTCATACAGACCTGTTTTAACGCCTGCTCCGTAAAAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGaa                                                                                   <  2:763219/148‑1 (MQ=255)
                                                                    aTGCCTCATCAGACACCATGGACAAAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGACACAAGAGCAGGCGTTTTTTTATGTATCAGTAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAgg                                                                                 <  1:800031/149‑1 (MQ=255)
                                                                       ccTCATCAGACACCATGGACACAACGTTGGGTGAAGCACCCCCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGACGTGCTTGCCTCCGGGTGAgaacgaac                                                                              >  2:220399/1‑149 (MQ=255)
                                                                        cTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAact                                                                             >  1:726996/1‑149 (MQ=255)
                                                                          cagcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAactac                                                                           <  1:574793/146‑1 (MQ=255)
                                                                           atcaGACACCATGGACACAACGTTGAGAGAAGACCCCACTTGTTATCATACAGACCTCTTTTAACTCCTGCTCCGTAATAAGAGCACGCGTTTTTTTATCTATAAGGAAACACCCGGCGGTGATTGCCTCCGGATGCGAAGCAactact                                                                          >  2:265643/1‑149 (MQ=255)
                                                                            tcaGACACCATGGACACAACGTTGAGTGACGCACCCACATGTTGACATACAGACATGGTTTCACGCCTGCGCCGTAATAAGAGCAGGCGTTTTTTTATGTGTCGGGAAGGCCCCGGAGGTGCTTGGCTCCGGGTGAGAAGGagcgcctg                                                                         >  1:718975/1‑142 (MQ=255)
                                                                                 cacCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTTCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCg                                                                    <  1:757032/149‑1 (MQ=255)
                                                                                  acCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCgg                                                                   <  1:650932/149‑1 (MQ=255)
                                                                                  acCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCGCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCgg                                                                   <  1:392880/149‑1 (MQ=255)
                                                                                     aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGtt                                                                >  2:800378/1‑149 (MQ=255)
                                                                                      tGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTa                                                               <  2:443337/149‑1 (MQ=255)
                                                                                             aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAACGAACTACTGTGGCGGGTTATTCTGCa                                                        >  1:383256/1‑149 (MQ=255)
                                                                                                gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGCGAAGGAACTACTGTGGCGGGTTATTCTGCACCg                                                     >  1:304854/1‑149 (MQ=255)
                                                                                                gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGGGGGAAGGAACTACTGTGGCGGGTTATTCTGCAACg                                                     >  1:34982/1‑149 (MQ=255)
                                                                                                gTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATAAGGAGAAGCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACGGTGGCGGGTTATTCTGCAACg                                                     >  1:836141/1‑149 (MQ=255)
                                                                                                 ttGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGt                                                    <  1:30355/149‑1 (MQ=255)
                                                                                                 tgcaGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGt                                                    <  2:275230/146‑1 (MQ=255)
                                                                                                     gTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAAc                                                <  2:473433/149‑1 (MQ=255)
                                                                                                      tGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACa                                               >  2:759590/1‑149 (MQ=255)
                                                                                                           cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaaa                                          <  1:800378/149‑1 (MQ=255)
                                                                                                           cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGACTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaaa                                          <  1:242551/149‑1 (MQ=255)
                                                                                                              ccACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGCGAGAAGGAACTACTGTGGCGGGTTATTCTGCCACGCTAACACCAAACCg                                       >  1:89569/1‑149 (MQ=255)
                                                                                                                             cAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCt                        <  1:353073/149‑1 (MQ=255)
                                                                                                                              aGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTg                       >  1:502738/1‑149 (MQ=255)
                                                                                                                                     ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc                >  2:307989/1‑149 (MQ=255)
                                                                                                                                              cTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGCCGCATAGCTGCAGCTTCTTCCGGCtt       >  1:99887/1‑149 (MQ=255)
                                                                                                                                                   ccGTAATAAGAGCAGGCGTTTTTTTATGTATCAGTAAGGCCGCGGGGGTGCTTGCCCCCGGGTGGGAAGGAACTAGTGTGGTGGGTTGTTCTGCAACGTTCACATCAAACCGACGCGCCTCGTAGCGGCAACTTCTTCCGGCTCTTGCa  >  2:37694/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGCCTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCA  >  NC_000913_3_pae_tpiA/3986467‑3986762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.