BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 1979269	NA (NA)	104 (0.810)	83/254	0.6	91.3%	intergenic (‑54/‑484)	insA/uspC	IS1 repressor TnpA/universal stress protein
*	?	NC_000913_3_pae_tpiA	2490618 =	10 (0.080)	104 (0.810)	83/254	0.6	91.3%	coding (1333/1695 nt)	oxc	oxalyl CoA decarboxylase, ThDP‑dependent

Only 100 of 111 total aligned reads displayed.

CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/1979121‑1979269

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAC  >  NC_000913_3_pae_tpiA/2490618‑2490767

CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                       >  1:346370/1‑150

CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGCTACGCACCACCACGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                       >  2:313172/1‑150

     ATAGCGATGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGG                                                                                                                                                  <  4:60851/150‑1

      TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGC                                                                                                                                                 <  3:674322/150‑1

      TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGC                                                                                                                                                 <  2:1462067/150‑1

         CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGAC                                                                                                                                              <  2:1523416/150‑1

         CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGAC                                                                                                                                              >  4:604353/1‑150

            TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAAC                                                                                                                                           <  1:401857/150‑1

               TGTCCGGCGGGGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGG                                                                                                                                        <  1:266634/150‑1

                   CGGCGGTGCTTATGCCGGTAAGAACCACCCCGTCAGTAGCTGATCAGGAGGGACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTGAATCCGTAAGTTGGCAGCATCACCAATGGCGACATCCGGAGAA                                                                                                                                    <  4:211997/150‑1

                    GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAAC                                                                                                                                   <  2:661784/150‑1

                       GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAG                                                                                                                                <  2:482353/150‑1

                                GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGC                                                                                                                       <  4:200757/150‑1

                                         CACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGA                                                                                                              >  4:679134/1‑150

                                          ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAT                                                                                                             >  2:726832/1‑150

                                            CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGG                                                                                                           >  1:730960/1‑150

                                               CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCAT                                                                                                        >  2:511892/1‑150

                                                CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTC‑AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAG                                                                                                      >  1:1264221/1‑150

                                                  GTCAGTAGCTGAGCAGGAGAGACAGCTGATAGAAACAGAAGCCACTGGGGCACCTCAAAAACACCAACAAACACTAAATCAGGAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTCGCACCGATGGCATAGC                                                                                                     >  2:1324238/1‑150

                                                    CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGTAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCC                                                                                                   <  2:1307602/150‑1

                                                      GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATA                                                                                                       <  1:1151328/144‑1

                                                      GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATA                                                                                                       >  2:1151328/1‑144

                                                      GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTA                                                                                                                     >  1:1316388/1‑130

                                                      GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCG                                                                                                                                                <  1:1130405/103‑1

                                                      GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCG                                                                                                                                                >  2:1130405/1‑103

                                                         GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACC                                                                                              >  4:801596/1‑150

                                                           TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAT                                                                                                             >  2:670232/1‑133

                                                           TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAT                                                                                                             <  1:670232/133‑1

                                                            GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGAT                                                                                           >  2:427542/1‑150

                                                             AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAC                                                                                                                 <  4:711391/127‑1

                                                             AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGG                                                                                                                                        <  1:952119/104‑1

                                                             AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGG                                                                                                                                        >  2:952119/1‑104

                                                              ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGC                                                                                         >  4:103741/1‑150

                                                                AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCC                                                                                       <  3:604353/150‑1

                                                                  GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT                                                                                     <  1:427542/150‑1

                                                                  GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGA                                                                                                                                       <  3:89748/100‑1

                                                                  GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGA                                                                                                                                       >  4:89748/1‑100

                                                                      GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACA                                                                                 >  1:1499073/1‑150

                                                                        CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACC                                                                               >  4:406204/1‑150

                                                                            TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAG                                                                           <  2:815332/150‑1

                                                                            TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAG                                                                           >  1:980337/1‑150

                                                                             GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCAC                                                                                                                         >  4:298935/1‑103

                                                                             GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCAC                                                                                                                         <  3:298935/103‑1

                                                                                AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAC                                                                       >  4:258309/1‑150

                                                                                AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTAC                                                                       <  2:730960/150‑1

                                                                                    ACAGAAGCCACTGGAGCACCTCAAAAACACCATCACCCACTAAATCAGGAAGTCGGCAGCATCACCAATGCCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGACTGCATAGCCCATACCGCTGCCCATTACACCCCCGATACCACA                                                                   >  4:844130/1‑150

                                                                                      AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAAT                                                                 >  1:927556/1‑150

                                                                                      AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAAT                                                                 <  3:406204/150‑1

                                                                                       GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAATCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACGATC                                                                >  2:1263720/1‑150

                                                                                       GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATC                                                                <  3:10196/150‑1

                                                                                       GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATC                                                                <  4:474786/150‑1

                                                                                         AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                       >  4:562975/1‑61

                                                                                         AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC                                                                                                                                                       <  3:562975/61‑1

                                                                                                 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCAC                                                                                                                 <  2:1421349/91‑1

                                                                                                    CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGT                                                   >  1:191878/1‑150

                                                                                                       CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAT                                                                                                             >  1:1376275/1‑89

                                                                                                       CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGAT                                                                                                             <  2:1376275/89‑1

                                                                                                        TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCAGAATCCAGACGACGACGTGGTT                                               >  1:113657/1‑150

                                                                                                        TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTT                                               >  1:863771/1‑150

                                                                                                        TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                                      >  4:676222/1‑47

                                                                                                        TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                                      <  3:676222/47‑1

                                                                                                        TCAAAAACACCATCATACACTAAAGCAATAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTT                                               <  1:1496823/150‑1

                                                                                                         CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGT                                                                         <  3:294858/123‑1

                                                                                                         CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGT                                                                         >  4:294858/1‑123

                                                                                                          AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTA                                             <  3:258309/150‑1

                                                                                                          AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTA                                             <  3:89828/150‑1

                                                                                                          AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTA                                             <  2:118795/150‑1

                                                                                                            AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATA                                           <  3:679134/150‑1

                                                                                                            AAACACCAACATACACTAAATCAGTAAGTTGGCAGCATCCTCAATTGCGAAAATCGGCGAACCAGAAGTCACGCTATCTCCGATGTCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATA                                           <  1:1324238/150‑1

                                                                                                                 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT                                                                                     <  3:278327/103‑1

                                                                                                                 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCAT                                                                                     >  4:278327/1‑103

                                                                                                                  CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATC                                     >  1:648150/1‑150

                                                                                                                  CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATC                                     >  1:1049263/1‑150

                                                                                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCC                                                                                        <  4:165942/95‑1

                                                                                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCC                                                                                        >  3:165942/1‑95

                                                                                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAG                                                                                                      >  4:532323/1‑81

                                                                                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAG                                                                                                      <  3:532323/81‑1

                                                                                                                       TACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAA                                <  4:838349/150‑1

                                                                                                                       TACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCC                                                                             >  2:41186/1‑105

                                                                                                                       TACACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCC                                                                             <  1:41186/105‑1

                                                                                                                         CACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATA                              <  2:927556/150‑1

                                                                                                                          ACTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATAT                             >  2:1323890/1‑150

                                                                                                                           CTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGC                                                                                                                       >  3:51024/1‑59

                                                                                                                           CTAAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGC                                                                                                                       <  4:51024/59‑1

                                                                                                                             agATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTC                          <  4:327997/148‑1

                                                                                                                             AAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACG                                                                                                                        >  2:1098345/1‑56

                                                                                                                             AAATCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACG                                                                                                                        <  1:1098345/56‑1

                                                                                                                                TCAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCAGAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTG                       <  2:113657/150‑1

                                                                                                                                 CAGTAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATGGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGGCGACGACGTGGTTTATACATATCAATAATATTTCGTGC                      <  4:354637/150‑1

                                                                                                                                    TAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATC                                                                <  2:1524610/105‑1

                                                                                                                                    TAAGTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATC                                                                >  1:1524610/1‑105

                                                                                                                                       GTTGGCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATC                >  2:1130699/1‑150

                                                                                                                                           GCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGG            >  3:130309/1‑150

                                                                                                                                           GCAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGG            >  1:972299/1‑150

                                                                                                                                            CAGCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGG           <  2:1264221/150‑1

                                                                                                                                              GCATCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTA         <  2:191878/150‑1

                                                                                                                                                 TCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTT      >  1:1136699/1‑150

                                                                                                                                                 TCACCAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTT      >  1:544795/1‑150

                                                                                                                                                     CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAC  >  3:909026/1‑150

                                                                                                                                                     CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAC  >  3:566017/1‑150

CAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/1979121‑1979269

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATGGCGACAACCGGAGAACCAGAAGTCACGCTAGCACCGATGGCATAGCCCATACCGATGCCCATGACACCCCAGGTACCACAATCCAGACGACGACGTGGTTTATACATATCAATAATATTTCGTGCATTATCCAGGGTATTTGCAC  >  NC_000913_3_pae_tpiA/2490618‑2490767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.