New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 377527NA (NA)4 (0.140) 4/274 3.5 10.8% intergenic (+216/+8) yaiL/frmB DUF2058 family protein/S‑formylglutathione hydrolase
?NC_000913_3_pae_tpiA = 377605 35 (1.190)coding (764/834 nt) frmB S‑formylglutathione hydrolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGACC  >  NC_000913_3_pae_tpiA/377458‑377750
                                                                                                                                                   |                                                                                                                                                 
tttATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCt                                                                                                                                                  <  2:139794/148‑1 (MQ=255)
    tCAAGCCTATGGATTACGGGTGAAGGGTAGGCCGAATAAGGCGTTCACGACGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGCCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGa                                                                                                                                              <  1:342930/149‑1 (MQ=38)
           tACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAc                                                                                                                                       <  1:178147/149‑1 (MQ=255)
                      ggCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATaa                                                                                                                            <  1:235818/149‑1 (MQ=255)
                       gCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAAc                                                                                                                           >  1:325598/1‑149 (MQ=255)
                            gtgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGAAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGAtt                                                                                                                      <  1:15749/149‑1 (MQ=255)
                                  gCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTc                                                                                                                >  1:197231/1‑149 (MQ=255)
                                        tAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGata                                                                                                          <  1:346467/149‑1 (MQ=255)
                                         aaGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGatat                                                                                                         <  1:493205/149‑1 (MQ=255)
                                         aaGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGCGGTCGGGATTAAGCTCGCCAATAAAGCTGGAGACAAAATCATAGGTGTCATCCTCACGCGCGTGCTAACGGAGTAACGTCtttgtct                                                                                                         >  1:15552/1‑144 (MQ=255)
                                                  aCGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACACTCGTGATAACGGATTAACGTCTTGATACTAATATCCt                                                                                                >  2:323038/1‑149 (MQ=255)
                                                   cgccgcATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTg                                                                                               >  1:38952/1‑149 (MQ=255)
                                                                       cTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTg                                                                           <  1:313875/149‑1 (MQ=255)
                                                                                    atatTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTATTAATATTCATCTCCTGGAAGATCTTTTCAAGCTTTGGAGTACGCAGCTg                                                              >  2:472102/1‑149 (MQ=255)
                                                                                       ttCAGTTTTTTTGCGTGGAAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTc                                                           <  1:353059/149‑1 (MQ=255)
                                                                                       ttCAGTTTATTGGCGTGGTAGGCAATAGGCTCGCCCACAAAACTGGACACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATGCACCTCTCGATATTCATCTCCTTGCAGCTCTTTTCAAACGGTGGATACCGCAGCTGtgc                                                           >  2:92826/1‑147 (MQ=255)
                                                                                       ttCAGTTTATGGGCGATGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGTATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTc                                                           <  2:66421/149‑1 (MQ=255)
                                                                                          aGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATGTTCATCTCCTGGCAGATCTCTTCAAGATATGGAGGCCGCTGCCGTTCtac                                                        >  2:429027/1‑147 (MQ=255)
                                                                                                   gCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCCGCTGTTCTGCGTAAAAatc                                               >  1:245601/1‑149 (MQ=255)
                                                                                                    cGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAatca                                              <  2:38952/149‑1 (MQ=255)
                                                                                                     gTGGTCGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCTCAGCTGTTCTGCGTAAAAatcat                                             <  1:195528/149‑1 (MQ=255)
                                                                                                     gTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAatcat                                             >  1:152019/1‑149 (MQ=255)
                                                                                                      tGGTAGGCAATATGCTCGCCAATAAAACAGGACCCACGCGGGGAGCTGTGATCATAACCCTCGTGGTAACGGCTTAAGGTCTTGATATTCATATCCTGGCAGATCTTTTTAAGTTTTGGAGTCCGCAGCTGTTCTGCATAGAGatcatc                                            >  2:504455/1‑149 (MQ=255)
                                                                                                           ggCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAGTCctcactca                                       >  1:80560/1‑149 (MQ=255)
                                                                                                                  tGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGAttt                                                                            >  1:484753/1‑105 (MQ=255)
                                                                                                                  tGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGAttt                                                                            <  2:484753/105‑1 (MQ=255)
                                                                                                                       gCCAAAAAAACTCGAGGCAAAATAATAGCTTTCACTATACCCCGCGTGATAGAGGATTAACGGCTTGATACTCATCTCCTTGCAAAGCTTTGCAACAATTTACGTCAGACGAAGTTCTGCGTAAAAATCATCACTCATCTCCtcttcga                           <  2:387484/149‑7 (MQ=255)
                                                                                                                        agaaTAAAACAGAAGAAAAAAAAGTGGTTGGCAGCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCCGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAAc                          <  2:108269/147‑1 (MQ=255)
                                                                                                                          aaTAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATCCATCTCCTCGCAGATCTTTTCAAGATTTGAAGTCCCCAGCTGTTCTGCGTAAAAATCACACCCCAACCCCTGAACAACCa                        >  2:127674/1‑149 (MQ=255)
                                                                                                                            tAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATg                      >  1:160867/1‑149 (MQ=255)
                                                                                                                                    gagaCAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGc              >  2:210008/1‑149 (MQ=255)
                                                                                                                                      gaCAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCAGTTCTGCGTAAAAATCATCACTCAAACCCTGATCAACCATGATTTCCGCaa            >  1:60336/1‑149 (MQ=255)
                                                                                                                                       aCAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGAAGTCCGCAGCTGTTCTGCGTAAAAATAATCAATCAACACCTGATCAACCATGAATTCAGCCAc           >  2:24072/1‑149 (MQ=255)
                                                                                                                                            ataataGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGtt      <  1:324699/149‑1 (MQ=255)
                                                                                                                                                taGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGAcc  >  1:381921/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCTCCTGGCAGATCTTTTCAAGATTTGGAGTCCGCAGCTGTTCTGCGTAAAAATCATCACTCAACCCCTGATCAACCATGATTTCCGCAACGCGTTGACC  >  NC_000913_3_pae_tpiA/377458‑377750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.