| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 2,981,457 | T→G | K242N (AAA→AAC) | araE ← | arabinose transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 2,981,457 | 0 | T | G | 99.1% | 374.7 / NA | 108 | K242N (AAA→AAC) | araE | arabinose transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (55/52); minor base A (0/1); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 111 total aligned reads displayed.
GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGACTACCAG > NC_000913_3_pae_tpiA/2981311‑2981603 | gTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGgttt < 1:1196750/150‑1 (MQ=255)gTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGgttt > 1:911422/1‑150 (MQ=255)gTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGATCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGCGGTTACGGTGAATCTTAAACACTGCCCACTCGCGCTGgttt > 4:243108/1‑150 (MQ=255) tAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTa > 3:149916/1‑150 (MQ=255) aaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAAc < 4:864264/150‑1 (MQ=255) aaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAAc < 4:2695/150‑1 (MQ=255) aGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACt > 2:694144/1‑150 (MQ=255) cccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTc > 2:942169/1‑150 (MQ=255) ttttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCttt < 1:123693/150‑1 (MQ=255) tttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTGTc < 2:911422/150‑1 (MQ=255) ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCa < 4:583894/150‑1 (MQ=255) ttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCa < 1:1325468/150‑1 (MQ=255) catgtactACGCGCCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCa > 2:369733/8‑150 (MQ=255) gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAAt < 4:149916/150‑1 (MQ=255) aCGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTc > 3:277278/1‑150 (MQ=255) cgcgTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAg < 3:655174/150‑1 (MQ=255) agtaCATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACGTACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGttctt < 4:866001/150‑1 (MQ=255) atgatgatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTcgc < 1:942169/150‑1 (MQ=255) atgatgatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTcgc < 1:1637892/150‑1 (MQ=255) gatgatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTtctc > 3:232141/1‑146 (MQ=255) gatgatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCgcgc < 4:942617/150‑1 (MQ=255) gatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCttt > 4:630597/1‑150 (MQ=255) gatgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCttt < 1:369733/150‑1 (MQ=255) tgTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCTCAACTACCCAGGATTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCttttt > 1:484593/1‑150 (MQ=255) gTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGa < 4:563289/121‑1 (MQ=255) gTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGa > 3:563289/1‑121 (MQ=255) gTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTCCAGGCTTTCACGAATTTCGTTGAGTTCATCTCGCGCTTTTTc > 2:682591/1‑150 (MQ=255) ttCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTcc < 1:694144/150‑1 (MQ=255) gTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAAc > 1:690211/1‑96 (MQ=255) gTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAAc < 2:690211/96‑1 (MQ=255) gTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGa < 4:986201/143‑1 (MQ=255) gTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGa > 3:986201/1‑143 (MQ=255) ctgcATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCa > 2:1012413/1‑100 (MQ=255) ctgcATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCa < 1:1012413/100‑1 (MQ=255) cATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACg > 1:968918/1‑150 (MQ=255) tCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGACTTTCGTTGAGTTCTTCGCGCGCTTTTTTCGACGTATCTCGCACCATCCGCa > 2:1289396/1‑150 (MQ=255) tCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCa > 3:430509/1‑150 (MQ=255) tCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGCTACGGTAAATCTTAAACAGTACCCAACCACCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGGTGTACTCGCGCTTTGTCCGCCGTATAGCGCAGCATACGCa > 2:540580/1‑150 (MQ=255) tGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATAct < 3:810358/150‑1 (MQ=255) caacaaCATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGc < 2:669651/83‑1 (MQ=255) caacaaCATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGc > 1:669651/1‑83 (MQ=255) caacaaCATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATActtc > 3:715695/1‑150 (MQ=255) aacaacATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTc < 2:132194/78‑1 (MQ=255) aacaacATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGtt < 1:1254587/98‑1 (MQ=255) caacaTACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACttcttc < 2:1519527/150‑1 (MQ=255) acaTACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCg < 2:1210780/150‑1 (MQ=255) caTACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGc > 2:368908/1‑150 (MQ=255) caTACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGc < 3:630597/150‑1 (MQ=255) tACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCt > 4:393503/1‑150 (MQ=255) cGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAg > 4:747702/1‑70 (MQ=255) cGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAg < 3:747702/70‑1 (MQ=255) cGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGTGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCCCaa > 4:906239/1‑150 (MQ=255) cGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCGGCATACGCAATACTTCTTCCGCCTCaa > 1:1265365/1‑150 (MQ=255) gagaAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCttt > 4:799048/1‑74 (MQ=255) acaGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGc > 1:1082505/1‑150 (MQ=255) cACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATActtc > 1:1479796/1‑127 (MQ=255) cACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATActtc < 2:1479796/127‑1 (MQ=255) cACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCt > 1:367782/1‑150 (MQ=255) gacggacgTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCtttt > 3:903196/1‑150 (MQ=255) cggacgTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTcc < 2:1494667/150‑1 (MQ=255) ggacgTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCg > 4:357513/1‑150 (MQ=255) gacgTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCttt < 3:158197/145‑1 (MQ=255) gacgTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCttt > 4:158197/1‑145 (MQ=255) tACGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCgccagcc > 1:164656/1‑150 (MQ=255) aCGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCgccagcca < 3:357513/150‑1 (MQ=255) cGGTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGccagccag > 1:77066/1‑150 (MQ=255) ggTTGATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCcagccagc > 3:5067/1‑150 (MQ=255) gATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCgcc > 3:169067/1‑139 (MQ=255) gATCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCgcc < 4:169067/139‑1 (MQ=255) tCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTcgcg > 1:591767/1‑69 (MQ=255) tCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTcgcg < 2:591767/69‑1 (MQ=255) tCTTAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCAGCCTCAATATGACGCCCCTTTTCCGCCAGCCTGCGCgggg > 2:753738/1‑149 (MQ=255) ttAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTa > 3:927447/1‑150 (MQ=255) ttAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTa > 1:1459052/1‑150 (MQ=255) ttAAACAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTa > 1:1270418/1‑150 (MQ=255) aaaCAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATActtc > 1:1250269/1‑102 (MQ=255) aaaCAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATActtc < 2:1250269/102‑1 (MQ=255) aaCAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTAttt < 1:368908/150‑1 (MQ=255) aCAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGccc < 3:543235/121‑1 (MQ=255) aCAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGccc > 4:543235/1‑121 (MQ=255) cAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTTTCGTTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTgg < 1:29373/150‑1 (MQ=255) cAGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTgg < 2:1082505/150‑1 (MQ=255) aGTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGc < 2:164656/150‑1 (MQ=255) gTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCa < 1:277059/150‑1 (MQ=255) gTGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCa < 4:596599/150‑1 (MQ=255) tGCCCAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAg < 2:1270418/150‑1 (MQ=255) cccAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGa > 1:261557/1‑150 (MQ=255) ccAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCg > 3:288202/1‑65 (MQ=255) ccAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCg < 4:288202/65‑1 (MQ=255) ccAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGaa > 2:297989/1‑150 (MQ=255) ccAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGaa < 4:903196/150‑1 (MQ=255) cAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACg < 2:1490813/110‑1 (MQ=255) cAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACg > 1:1490813/1‑110 (MQ=255) cAACCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAg > 1:1047185/1‑150 (MQ=255) aaCCGCCCTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGa < 1:1289396/150‑1 (MQ=255) cccTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTcg > 3:60997/1‑47 (MQ=255) ccTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTAtt < 3:993851/133‑1 (MQ=255) ccTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGACTACCa > 1:379332/1‑150 (MQ=255) ccTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGACTACCa < 2:1047185/150‑1 (MQ=255) cTGGTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGACTACCAg > 4:179654/1‑150 (MQ=255) | GTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTTTTAACTTCAGGCTTTCACGAATTTCGTTGAGTTCTTCTCGCGCTTTTTCCGACGTATCGCGCAGCATACGCAATACTTCTTCCGCCTCAATATGACGCCCCTTTTCCGCCAGCCAGCGCGGGCTATTTGGCAGGAAGACTACCAG > NC_000913_3_pae_tpiA/2981311‑2981603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |