| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 3870594 | 9 (0.720) | 6 (0.510) | 6/246 | 0.7 | 42.1% | coding (1137/1293 nt) | dgoT | D‑galactonate transporter |
| ? | NC_000913_3_pae_tpiA | = 3870607 | 8 (0.680) | coding (1124/1293 nt) | dgoT | D‑galactonate transporter | |||||
GCGCTTCACATCGCCCACCAGCAGGATATAAGAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGCAGGTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAGGCACATAATCATCATCGGATCGTTAGTGT > NC_000913_3_pae_tpiA/3870447‑3870733 | gcgcTTCACATCGCCCACCAGCAGGATATAAGAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGCAGGTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGaa > 3:69047/1‑150 (MQ=255) agGATATAAGAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGCAGGTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGgcgtgtttaacttcgccggtggtc < 4:13537‑M1/150‑25 (MQ=255) tCAACGCGACGGCGGAGATATAAACCAGTGCAGGTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGgcgtgtttaacttcgccggtggtctgggcggcatcaccgttccgct < 1:98142‑M1/150‑47 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCcgccgg < 4:27339‑M2/90‑7 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCcgccgg > 3:27339‑M2/1‑84 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGc < 1:15550/148‑1 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGc > 2:15550/1‑148 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGACGCCGCCCAGACCACCGGCGAAGTTAAACACGCcgccggtggtctgg < 4:16010‑M2/98‑15 (MQ=255) gTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGACGCCGCCCAGACCACCGGCGAAGTTAAACACGCcgccggtggtctgg > 3:16010‑M2/1‑84 (MQ=255) aaaCCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGgcgtgtttaacttcgccggtg < 1:88219‑M1/87‑22 (MQ=255) aaaCCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGgcgtgtttaacttcgccggtg > 2:88219‑M1/1‑66 (MQ=255) caccaccaGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAg > 1:58760/1‑150 (MQ=255) caccaccaGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGAGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAg > 4:65333/1‑150 (MQ=255) caccaGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAGGca < 2:58760/150‑1 (MQ=255) accaGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGt > 1:39674/1‑121 (MQ=255) accaGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGt < 2:39674/121‑1 (MQ=255) aGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcacctgcactggtttatatctccgccgtcgcgttga < 1:98142‑M2/150‑105 (MQ=255) gAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAGGCACATAatca < 3:64576/150‑1 (MQ=255) ccAGACCACCGGCGgcgtgtttaacttcgccggtggtctgggcggcgtcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcac > 3:16010‑M1/1‑14 (MQ=255) ccAGACCACCGGCGgcgtgtttaacttcgccggtggtctgggcggcgtcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcac < 4:16010‑M1/98‑85 (MQ=255) gACCACCGGCGAAGTTAAACACGCcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcacctgcactggtttatatctccgccgtcgcgttgattggcgcgctctcttatatcct < 4:13537‑M2/150‑127 (MQ=255) caccGGCGAAGTTAAACACGCcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggttt > 2:88219‑M2/1‑21 (MQ=255) caccGGCGAAGTTAAACACGCcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggttt < 1:88219‑M2/87‑67 (MQ=255) ccGGCGgcgtgtttaacttcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcac > 3:27339‑M1/1‑6 (MQ=255) ccGGCGgcgtgtttaacttcgccggtggtctgggcggcatcaccgttccgctggtggtggggtacctggcgcagggttacggtttcgcac < 4:27339‑M1/90‑85 (MQ=255) | GCGCTTCACATCGCCCACCAGCAGGATATAAGAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGCAGGTGCGAAACCGTAACCCTGCGCCAGGTACCCCACCACCAGCGGAACGGTGATGCCGCCCAGACCACCGGCGAAGTTAAACACGCCGCCGGTTAAACCAATCAGGCGCATCGGTGCCAGAGAAGAAACCAGCGACCAGGTAATCGAAGCAAAACCGTTACCGAAGAATGCCAGCGCCATCAGGCACATAATCATCATCGGATCGTTAGTGT > NC_000913_3_pae_tpiA/3870447‑3870733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |