Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3250688	3250714	27	3 [1]	[0] 2	yqjF	putative quinol oxidase subunit

CGCAGTGGAGAGTATGATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCGCGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCGGG  >  NC_000913_3_pae_tpiA/3250546‑3250695                                                                                                                                              |         cgcAGTGGAGAGTATGATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCGCGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCggg  <  2:116719/150‑1 (MQ=255)                                                                gCCGATTCTGTTTATTACCGCTGGCTGGGGATAAATTACTGGCTACGCGGGTACCCAACACTATATGGAAGCAATGGGc          <  2:91685/79‑1 (MQ=255)                                                                gCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGc          >  1:91685/1‑79 (MQ=255)                                                                                                                                              |         CGCAGTGGAGAGTATGATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCGCGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCGGG  >  NC_000913_3_pae_tpiA/3250546‑3250695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑