Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	1124250	1124270	21	2 [0]	[1] 2	mdtH	multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin

GCCACCGATATAACCAATAGCGCCGCCAATCGCCAGACCCAGACGGCTAAACCCCATATAGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAG  >  NC_000913_3_pae_tpiA/1124268‑1124420    |                                                                                                                                                      gccACCGATATAACCAATAGCGCCGCCAATCGCCAGACCCAGACGGCTAAAGCCCATCTAGCTGCCGCGAGCTCTTGCGAGCGCCAGCGAAGCACGTAAGCTTTCACGCGCAGGCTCGGCAATAATCGACCCGAGATAAAACAGTCAAAt     >  2:129746/1‑150 (MQ=255)    aCCGATATAACCAATAGCGCCGCCAATCGCCAGACCCAGACGGCTAAACCCCATATAGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAg  >  2:87571/1‑150 (MQ=255)    |                                                                                                                                                      GCCACCGATATAACCAATAGCGCCGCCAATCGCCAGACCCAGACGGCTAAACCCCATATAGCTGCCGCGAGCTCTTGCGTCCGCCAGCGAAGCACTTAAGGTTTCACGCGCAGGCTCGGCAATGATCGACCCGATATAAAACAGACAAATCAG  >  NC_000913_3_pae_tpiA/1124268‑1124420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑