| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 2327312 | 110 (1.110) | 14 (0.160) | 14/244 | 8.8 | 12.4% | intergenic (+19/+55) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein |
| ? | NC_000913_3_pae_tpiA | = 2327320 | 99 (1.110) | intergenic (+27/+47) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/2327152‑2327312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacacccgataACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACGAGC < NC_000913_3_pae_tpiA/2327320‑2327174 GCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAA > 3:307235/1‑150 CTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACAC < 2:1036870/150‑1 ATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCC < 2:729800/150‑1 CTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATC < 4:610907/150‑1 GTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTTTTA < 1:753096/150‑1 CACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTTTTATT < 4:307235/150‑1 ACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAGCACCCGATAACTTTCGCTATCGGGT > 4:209379/1‑140 ACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAGCACCCGATAACTTTCGCTATCGGGT < 3:209379/140‑1 ACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTC < 1:908455/150‑1 ATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAA < 1:921235/150‑1 TGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGT < 4:242078/88‑1 TGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGT > 3:242078/1‑88 AGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGG > 2:77070/1‑68 AGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGG < 1:77070/68‑1 GGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTT < 2:399933/72‑1 GGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGTTT > 1:399933/1‑72 AATAAAAACACCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTG > 2:843893/1‑150 AAAACACCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCA < 4:5966/150‑1 ACCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGGCCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATA > 1:958599/1‑150 CCCGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATAC > 4:135294/1‑150 CGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACGA < 2:145273/150‑1 CGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACGA > 1:360617/1‑150 CGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCA > 1:101255/1‑126 CGATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCA < 2:101255/126‑1 GATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACG < 3:348925/148‑1 GATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACG > 4:348925/1‑148 ATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACGAGC < 2:72554/150‑1 ATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATC > 3:185216/1‑108 ATAACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATC < 4:185216/108‑1 GCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/2327152‑2327312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacacccgataACTTTCGCTATCGGGTGTTTTTATTGATTAATTCAACCGTTCAATCACCATCGCAATTCCCTGACCGCCGCCAATGCACAGTGTTGCCAGCCCCAGCGTTTTATCGCGTGCCTGCATGGCATGTAATAGTGTGACCAGAATACGAGC < NC_000913_3_pae_tpiA/2327320‑2327174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |