Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3423731–3424234	3424577–3424238	5–847	57 [56]	[54] 60	[rrfD]–[rrlD]	[rrfD],[rrlD]

GGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAC  >  NC_000913_3_pae_tpiA/3423581‑3423805                                                                                                                                                       |                                                                            ggtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGtt                                                                             <  1:533527/150‑1 (MQ=255)         tACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCt                                                                     <  1:378090/150‑1 (MQ=255)            ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAg                                                                  >  4:442171/1‑150 (MQ=255)            ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAg                                                                  >  3:677975/1‑150 (MQ=255)            ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAg                                                                  >  1:538800/1‑150 (MQ=255)             cAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGt                                                                 >  4:126091/1‑150 (MQ=255)               gagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTc                                                               >  4:680346/1‑150 (MQ=255)               gagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTc                                                               <  3:680346/150‑1 (MQ=255)                agttgAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCg                                                              <  1:525048/146‑1 (MQ=255)                agTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCg                                                              <  2:538800/150‑1 (MQ=255)                agTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCg                                                              <  2:290158/150‑1 (MQ=255)                    gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTACATTTGCTGACTGACAGCTCCATCAACTAGCATGGAGAATTACCA‑ACCACAAACATGAGGTACGGCGTTTCAGTTCTGAGTTCGGCAt                                                          >  3:117257/1‑150 (MQ=9)                    gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt                                                          >  2:87651/1‑150 (MQ=255)                    gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt                                                          >  1:821908/1‑150 (MQ=255)                     aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATg                                                         >  2:922971/1‑150 (MQ=255)                       cTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg                                                       >  1:105132/1‑150 (MQ=255)                       cTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg                                                       <  4:677975/150‑1 (MQ=255)                             agcTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAgg                                                 >  1:30038/3‑150 (MQ=255)                              ccTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                                <  2:105132/150‑1 (MQ=255)                              ccTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                                >  1:1076669/1‑150 (MQ=255)                                tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGc                                                            <  4:667696/136‑1 (MQ=255)                                tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGc                                                            >  3:667696/1‑136 (MQ=255)                                tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg                                              >  1:109992/1‑150 (MQ=255)                                tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg                                              >  2:459988/1‑150 (MQ=255)                                tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg                                              >  3:287029/1‑150 (MQ=255)                                     cTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGacca                                         <  3:442171/150‑1 (MQ=255)                                        aCCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcg                                      >  1:1277067/1‑150 (MQ=255)                                         ccAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgc                                     <  1:1140883/150‑1 (MQ=255)                                         ccAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgc                                     <  2:909586/150‑1 (MQ=255)                                          cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgcg                                    >  3:197328/1‑150 (MQ=255)                                               gTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACg                               <  3:126091/150‑1 (MQ=255)                                                tGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACgg                              <  1:87651/150‑1 (MQ=255)                                                       tACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGCGACCACCGCGCTACGGCCGCCAg                       >  2:993231/1‑150 (MQ=255)                                                           aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGa                                                                   >  3:223606/1‑102 (MQ=255)                                                           aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGa                                                                   <  4:223606/102‑1 (MQ=255)                                                                 gCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg             <  1:922971/150‑1 (MQ=255)                                                                 gCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg             <  4:287029/150‑1 (MQ=255)                                                                  gattttCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGt            >  2:485029/6‑150 (MQ=255)                                                                  ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCaaa                  >  1:40973/1‑144 (MQ=255)                                                                  ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCaaa                  <  2:40973/144‑1 (MQ=255)                                                                  ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGt            <  2:30038/150‑1 (MQ=255)                                                                     tatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGtact         >  2:475810/1‑147 (MQ=255)                                                                      atCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTa        >  1:392087/1‑150 (MQ=39)                                                                        cAGCACGCTAAATTTGATGCCTGGCAGTTACCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATc      <  2:821908/150‑1 (MQ=37)                                                                         aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCa     >  3:3086/1‑150 (MQ=37)                                                                         aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCa     >  2:1146122/1‑150 (MQ=37)                                                                          gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa                        >  3:269028/1‑130 (MQ=35)                                                                          gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa                        <  4:269028/130‑1 (MQ=37)                                                                          gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAg    >  4:292546/1‑150 (MQ=35)                                                                           cACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTc                                                               >  3:400039/1‑90 (MQ=39)                                                                           cACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTc                                                               <  4:400039/90‑1 (MQ=38)                                                                           cACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGa   >  4:282407/1‑150 (MQ=35)                                                                            aCGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAc  <  2:359707/150‑1 (MQ=33)                                                                              gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt       <  2:1043349/143‑1 (MQ=32)                                                                              gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt       >  1:1043349/1‑143 (MQ=32)                                                                               cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGtt                                                                >  4:113425/1‑85 (MQ=33)                                                                               cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGtt                                                                <  3:113425/85‑1 (MQ=33)                                                                                                                                                       |                                                                            GGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATC‑GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAC  >  NC_000913_3_pae_tpiA/3423581‑3423805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑