| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | 1757082 = | 5 (0.090) | 49 (0.840) | 45/278 | 0.4 | 90.7% | coding (1385/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913_3_pae_tpiA | 2101749 = | NA (NA) | intergenic (‑5/+146) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||
CAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATC > NC_000913_3_pae_tpiA/1756933‑1757230 | cAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTATCGAGCGGCactac > 1:33564/1‑150 (MQ=255)cAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCactac > 4:292925/1‑150 (MQ=255) aaGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCActacta > 1:100631/1‑150 (MQ=255) aGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTaa < 1:276268/150‑1 (MQ=255) aGGCGTTGTGCCGCAGCGTGTTAAGGAGATCACTTCTACGTATGATTTCTACCGTATGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACAGAAAGGTGACGTTGTATTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTaa < 2:484552/150‑1 (MQ=255) ggCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAg > 2:231505‑M1/1‑149 (MQ=255) aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAac < 4:284859‑M1/5‑1 (MQ=255) cGTTGTGCCGCAGCTTGTTAAAGAGATCGCTTCGACTGATGATTTGTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAgga < 2:435492‑M1/150‑4 (MQ=255) cGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAgga < 1:589830‑M1/150‑4 (MQ=255) ttGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaag > 1:415910‑M1/1‑145 (MQ=255) cGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcga < 1:45997‑M1/150‑12 (MQ=255) cGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcga > 1:448025‑M1/1‑139 (MQ=255) cGCAGCTTGGTAAAGAGATCACTTCTACGGATGATGTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGGAATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcga > 4:3541‑M1/1‑139 (MQ=255) aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTg < 3:127581‑M1/15‑1 (MQ=255) gCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTACTTATGGTTTCTGGTGCACTGGTACCGAGCGGCGCTACTAAggaaggtgcgaa < 2:362575‑M1/150‑13 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTc > 1:86840‑M1/133‑150 (MQ=255) atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCt > 2:129353‑M1/126‑150 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTa < 1:84237‑M1/28‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTa < 4:239339‑M1/28‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTc < 1:41705‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTc > 2:41705‑M1/121‑143 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAata < 1:82181‑M1/31‑1 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATAtt < 2:69871‑M1/33‑1 (MQ=255) ttCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatca > 4:361321‑M1/1‑117 (MQ=255) tCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcat > 2:295693‑M1/1‑116 (MQ=255) tCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcat < 1:295693‑M1/150‑35 (MQ=255) atgatTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAg < 2:32143‑M1/110‑2 (MQ=255) atgatTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAg > 1:32143‑M1/1‑109 (MQ=255) atTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 4:138292‑M1/150‑45 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaattaat < 2:227334‑M1/49‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGaattaatt > 2:441322‑M1/101‑150 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGt < 4:49903‑M1/53‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGtt < 2:538652‑M1/17‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGtt > 1:538652‑M1/91‑107 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGa < 3:350342‑M1/60‑1 (MQ=255) gggTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 2:487713‑M1/1‑93 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGaa > 4:54436‑M1/90‑150 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAg > 1:560698‑M1/89‑150 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAgcgc < 3:309880‑M1/65‑1 (MQ=255) aaGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 3:292925‑M1/150‑63 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGccc < 2:564597‑M1/67‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCgcccg < 1:348554‑M1/68‑2 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATgg > 4:16159‑M1/78‑150 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATgg < 1:310754‑M1/73‑1 (MQ=255) gCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 3:73602‑M1/1‑80 (MQ=255) tctGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:593306‑M1/150‑73 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCtt > 2:287599‑M1/72‑150 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCttttt > 2:84237‑M1/69‑150 (MQ=255) gagCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 1:231505‑M1/150‑79 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCtttttt > 1:23523‑M1/68‑150 (MQ=255) tcaaacatgaagaaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCttttttt > 2:282791‑M1/67‑150 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTttta < 4:46369‑M1/85‑1 (MQ=255) tCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 4:163252‑M1/150‑85 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTaa < 1:499073‑M1/90‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTCCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATc > 2:242769‑M1/59‑150 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATc > 1:580979‑M1/59‑150 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATGTCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATaa > 2:253012‑M1/54‑150 (MQ=255) gTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:55339‑M1/150‑99 (MQ=255) atgactgagtcacccgagaagaaaatccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTAGTATATCGAAGCGCCCTGATAGGCACTTTTTTTATTTAATCGATAACCAGaa < 2:553296‑M1/103‑1 (MQ=255) gcgTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctaatatgagttcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 2:119102‑M1/149‑102 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCaa < 2:399709‑M1/107‑1 (MQ=255) tGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaa > 4:88003‑M1/1‑45 (MQ=255) tGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaa < 3:88003‑M1/57‑13 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTTTTTTTTCTATAACCAGAAGCAATaaaa < 2:540474‑M1/112‑1 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATaaaaa > 3:268649‑M1/38‑150 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATaaaaaa > 3:239339‑M1/37‑150 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 4:221529‑M1/1‑39 (MQ=255) tATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 3:221529‑M1/109‑71 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAaaatc < 3:155632‑M1/116‑1 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTg < 2:459290‑M1/52‑1 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTg > 1:459290‑M1/32‑83 (MQ=255) agaatttccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCg > 2:82181‑M1/29‑150 (MQ=255) tGCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga > 2:590748‑M1/1‑27 (MQ=255) tccccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTc > 1:407718‑M1/23‑150 (MQ=255) gCACTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 1:53739‑M1/150‑125 (MQ=255) aCTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca > 3:200848‑M1/1‑24 (MQ=255) aCTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:170995‑M1/1‑24 (MQ=255) aCTGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 2:170995‑M1/73‑50 (MQ=255) ccgcttattcgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACt < 2:533445‑M1/131‑1 (MQ=255) tGGTACCGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga > 3:365160‑M1/1‑22 (MQ=255) ccGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:3656‑M1/113‑97 (MQ=255) ccGAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:3656‑M1/1‑17 (MQ=255) gAGCGGCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga < 4:43544‑M1/150‑136 (MQ=255) cgcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAAtct > 2:310754‑M1/11‑150 (MQ=255) gcaccttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAAtctc < 1:579842‑M1/141‑1 (MQ=255) gCACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 3:361321‑M1/150‑141 (MQ=255) cttccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACtt < 2:395832‑M1/145‑1 (MQ=255) cACTACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct < 3:3541‑M1/150‑142 (MQ=255) actactAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt < 2:601852‑M1/146‑139 (MQ=255) actactAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 1:601852‑M1/1‑8 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt > 1:494195‑M1/1‑6 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt > 2:59791‑M1/1‑6 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa < 2:146244‑M1/86‑81 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:146244‑M1/1‑6 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 2:27352‑M1/1‑6 (MQ=255) tactaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 1:27352‑M1/64‑59 (MQ=255) ccCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTAt < 3:61456‑M1/148‑1 (MQ=255) cCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATc < 3:3857‑M1/149‑1 (MQ=255) cCTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATc > 3:153773‑M1/2‑150 (MQ=255) actaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 3:14668‑M1/150‑146 (MQ=255) | CAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATC > NC_000913_3_pae_tpiA/1756933‑1757230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |