New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3140200	75 (1.140)	4 (0.070)	4/262	9.0	5.5%	coding (119/342 nt)	hybF	protein involved with the maturation of hydrogenases 1 and 2
	?	NC_000913_3_pae_tpiA	= 3140206	67 (1.100)					coding (113/342 nt)	hybF	protein involved with the maturation of hydrogenases 1 and 2
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGCGCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAGG  >  NC_000913_3_pae_tpiA/3140055‑3140347                                                                                                                                                  |                                                                                                                                                    cTGCGCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCaa                                                                                                                                                  <  2:1052955/149‑1 (MQ=255) cTGCGCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACCGCGCTCTCCTCaa                                                                                                                                                  >  2:323195/1‑149 (MQ=255)  tGCGCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCAACCTTGCGCCACCGTTCCGTGGCAGAAAATTTCAAAACTAAAACGGACGGCGCTCCCCTCAAc                                                                                                                                                 >  2:433413/1‑149 (MQ=255)     gcATCGTGCTGATGAATCTCCACCACCTGGCTGCTATCCCAGCACCAAGCCTGGGCGGGTTTACAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCa                                                                                                                                              <  1:983518/149‑1 (MQ=255)        tCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGga                                                                                                                                           <  1:1018440/149‑1 (MQ=255)        tCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCCCTCCTCAACGCAGga                                                                                                                                           <  2:854219/149‑1 (MQ=255)          gTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                         <  2:345441/149‑1 (MQ=255)            gCTGATGAATCTCCACCACCTGGGTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCAACGTTCCGTGGCAGACATTTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgc                                                                                                                                       <  1:933705/149‑1 (MQ=255)              tgatgaATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgcgc                                                                                                                                     >  1:690481/1‑149 (MQ=255)                atgaATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGACGACAATTTAAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAgcgcgc                                                                                                                                   >  2:833830/1‑149 (MQ=255)                     tctcCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGAAGGAGAGCGCGCCAAtt                                                                                                                              >  2:138098/1‑149 (MQ=255)                         caccacCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCa                                                                                                                          <  2:690481/149‑1 (MQ=255)                          accaccTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTACAg                                                                                                                         >  2:846737/1‑149 (MQ=255)                           ccaccTGGCTGCAATCCCAGCACCAAGCCTCAGACGGGCCGTAGTCGGGGTGGAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCACACCCCCACGCACGAGAGCGCGACCATTCCCAGc                                                                                                                        <  2:509908/149‑1 (MQ=255)                                 ggCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAAAGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCcacaag                                                                                                                  >  1:287213/1‑147 (MQ=255)                                    tGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAAc                                                                                                                                                 <  2:882361/115‑1 (MQ=255)                                    tGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAAc                                                                                                                                                 >  1:882361/1‑115 (MQ=255)                                     gCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACAcggcgg                                                                                                              <  1:71917/149‑1 (MQ=255)                                       aaTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTg                                                                                                            >  1:850281/1‑149 (MQ=255)                                        aTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCACCGCAGGAGAGCGCGCTAATTTCCAGCCACACGGCGGTGa                                                                                                           <  2:821900/149‑1 (MQ=255)                                        aTCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGa                                                                                                           >  1:720766/1‑149 (MQ=255)                                               cACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCtt                                                                                                    >  1:16387/1‑149 (MQ=255)                                                  cAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAAc                                                                                                 >  1:875168/1‑149 (MQ=255)                                                      ccTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCg                                                                                             >  1:692258/1‑149 (MQ=255)                                                        tGGGCCGGTTGATAGACGACATGTAAATCGCACCCTTGCGCCACCGTTCCGCGGCAGACAATTTCAAAACTAAAACGGACGGCGTTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGtg                                                                                           <  1:421805/149‑1 (MQ=255)                                                         gggCGGGTTTATAGACGATATGTAAAGCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGtgc                                                                                          <  2:550691/149‑1 (MQ=255)                                                               gcttATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGAGCGGCCCTCCCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGACGGTGACGCGCTTAACAGCGTCCCGCTcc                                                                                    >  2:740273/3‑149 (MQ=255)                                                               gTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTTAAACGGATTGCGCTCTCCTCAACGCAGGAGAGAGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTcc                                                                                    >  2:732778/1‑149 (MQ=255)                                                                   ataGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTACAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGCCCGTGACGCGCTTAACAGCGTGCTGCCGCGCCt                                                                                >  2:756707/1‑149 (MQ=255)                                                                    taGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTg                                                                               >  2:465764/1‑149 (MQ=255)                                                                     aGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGc                                                                              >  2:581761/1‑149 (MQ=255)                                                                      gACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGAACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAAATTCCAGCCACACGGCGCGGACCCGCGTAACATCGTGCTGCCCCGCCTGcc                                                                             >  2:66353/1‑149 (MQ=255)                                                                       aCGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACCGCGGTGACGCGCTTAACATGCGGCTTCTCCGCccgccg                                                                            >  2:892240/1‑149 (MQ=255)                                                                         gATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGGGCAAAAAGTCACCTACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGtt                                                                          >  1:1037791/1‑149 (MQ=255)                                                                         gATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCCCCCATTCCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGtt                                                                          <  2:654733/149‑1 (MQ=255)                                                                         gATATGGAAATCGAACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTTCGCCTGCCGtt                                                                          <  1:696733/149‑1 (MQ=255)                                                                            atGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCGCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCCTAACATAGTGCTGCTCCGCCTGCCGTTGGa                                                                       >  2:333008/1‑149 (MQ=255)                                                                             tGTAAATCGCCCCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTCCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGAt                                                                      <  1:345128/149‑1 (MQ=255)                                                                             tGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGAt                                                                      <  1:342676/149‑1 (MQ=255)                                                                               tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGt                                                                                                             >  2:860263/1‑108 (MQ=255)                                                                               tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGt                                                                                                             <  1:860263/108‑1 (MQ=255)                                                                               tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATaa                                                                    >  1:1022968/1‑149 (MQ=255)                                                                               tAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATaa                                                                    >  2:311783/1‑149 (MQ=255)                                                                                     gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                              <  2:692258/149‑1 (MQ=255)                                                                                     gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                              >  2:426791/1‑149 (MQ=255)                                                                                     gCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCaa                                                              <  1:917215/149‑1 (MQ=255)                                                                                         ccTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                         <  1:207656/70‑1 (MQ=255)                                                                                         ccTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGgaga                                                                                                                                         >  2:207656/1‑70 (MQ=255)                                                                                           ttGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCCGTCACACGCTGCACATCGTGCTGCTCCGCCAGCCGGTGCATAATTTCACcgccgc                                                        >  2:731809/1‑149 (MQ=255)                                                                                              cgcCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGctct                                                     >  1:958709/1‑149 (MQ=255)                                                                                                    cGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCaaa                                               <  1:311783/149‑1 (MQ=255)                                                                                                      ttCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGAAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAaga                                             <  1:138098/149‑1 (MQ=255)                                                                                                         ctgggCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGAc                                          <  1:433413/146‑1 (MQ=255)                                                                                                          gTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACa                                         >  1:715715/1‑149 (MQ=255)                                                                                                           tGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAACGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATACTTTAAACCGCGCTCTGGCAAAGACACaa                                        >  2:506380/1‑149 (MQ=255)                                                                                                              cAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGAGCCCTGGCCCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAAGCAACTc                                     >  1:488326/1‑149 (MQ=255)                                                                                                               aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATACTTTCACCGGCCCCCTGCCAAACAGAACACTCa                                    >  2:766563/1‑149 (MQ=255)                                                                                                               aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCa                                    >  2:142418/1‑149 (MQ=255)                                                                                                               aGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCa                                    <  1:220913/149‑1 (MQ=255)                                                                                                                  cAATTTCAAAACTAAAACGGACGGTGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGc                                 <  2:323038/149‑1 (MQ=255)                                                                                                                       tCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCATCGGCGCTCTGGCAAAGAGACAACTCATGCAtttt                            <  2:875168/149‑1 (MQ=255)                                                                                                                       tCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCAtttt                            >  1:240372/1‑149 (MQ=255)                                                                                                                        cAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTc                           <  2:1022968/149‑1 (MQ=255)                                                                                                                        cAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTCGGCCAATTTCATCGGCGCTCTGGCAAAGAGACAACTCATGCATTTTc                           <  1:1092268/149‑1 (MQ=255)                                                                                                                             cTAAAGCGGACGGCGCTCACATAAACGCGGGAGTGCCCGCCAATTTCCATCCACACGGCTTTGACGCCCTCAACATCGTGCGGCTTCGCCTGCCTTTGGATAATTTCCACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCAc                      <  2:832843/149‑1 (MQ=255)                                                                                                                               aaaaCGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTc                    <  2:715715/149‑1 (MQ=255)                                                                                                                                  acggacggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGa                                                                       <  1:731127/95‑1 (MQ=255)                                                                                                                                  acggacggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGa                                                                       >  2:731127/1‑95 (MQ=255)                                                                                                                                      acggCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGAc             <  1:833830/149‑1 (MQ=255)                                                                                                                                      acgcCGCTGTCCTCCACGCAGGAGAGCGCGCCAATTCCCCGCCAGATGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCCGCGTTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGAc             <  1:650016/149‑1 (MQ=255)                                                                                                                                                cctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAAcagcag   <  1:142418/149‑1 (MQ=255)                                                                                                                                                 ctcAACGCGGGCGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGACCTTAACATCTTGCTGCTCCGCCTGCCGTTGGATAATTTCCACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg  <  2:802629/149‑1 (MQ=255)                                                                                                                                                 ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATGGTGCTGCTCCGCCTGCAGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTACTGCGACCAAACaggagg  >  2:284207/1‑149 (MQ=255)                                                                                                                                                 ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg  >  2:761805/1‑149 (MQ=255)                                                                                                                                                 ctcAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAgg  >  1:1010267/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CTGCGCATCGTGCTGATGAATCTCCACCACCTGGCTGCAATCCCAGCACCAAGCCTGGGCGGGTTTATAGACGATATGTAAATCGCACCCTTGCGCCACCGTTCCGTGGCAGACAATTTCAAAACTAAAACGGACGGCGCTCTCCTCAACGCAGGAGAGCGCGCCAATTTCCAGCCACACGGCGGTGACGCGCTTAACATCGTGCTGCTCCGCCTGCCGTTGGATAATTTCAACGGCGCTCTGGCAAAGAGACAACTCATGCATTTTCGCCACTCCTGCGACCAAACAGCAGG  >  NC_000913_3_pae_tpiA/3140055‑3140347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.