New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 416275591 (3.660)3 (0.130) 3/270 3.1 3.4% coding (432/1101 nt) trmA tRNA m(5)U54 methyltransferase, SAM‑dependent; tmRNA m(5)U341 methyltransferase
?NC_000913_3_pae_tpiA = 4162765 85 (3.600)coding (422/1101 nt) trmA tRNA m(5)U54 methyltransferase, SAM‑dependent; tmRNA m(5)U341 methyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTCGGCTGGGTAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGA  >  NC_000913_3_pae_tpiA/4162611‑4162893
                                                                                                                                                |                                                                                                                                          
gTTCGGCTGGGTAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCa                                                                                                                                        <  2:25645/149‑1 (MQ=255)
  tCGGCTGGGTAAAGCTGTTTTCTACCTGACGGTAGCTCATCTCTTTACCTGAGACCGGCAGACGTTAATCGATGTACTCTTGATCCAGCTCGATTTTTGTTGTCATTGCCCTACCAATCAGATGCACTTATCGTTTTTgcgcgcgccat                                                                                                                                      >  2:264019/1‑146 (MQ=255)
   cGGCTGGGTAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTg                                                                                                                                     >  1:261050/1‑149 (MQ=255)
        gggTAAAGCTGTTTTCCACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCAATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATAAGAAACCCATTCAGATTCTGCGCGCGCAGTGCATcg                                                                                                                                <  1:417692/149‑1 (MQ=255)
           tAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATTAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCgcgc                                                                                                                             >  1:81158/1‑149 (MQ=255)
           tAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCCGATGCACATTCAGATTCTGCGCGCGCAGTGCATCgcgc                                                                                                                             >  2:222251/1‑149 (MQ=255)
            aaaGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCa                                                                                                                            <  1:246625/149‑1 (MQ=255)
            aaaGCTGTTTTCTACCTGACGGTAGATCAGCTCTGTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCa                                                                                                                            <  2:79920/149‑1 (MQ=255)
            aaaGCTGTTTTCTACCTGAACGGATAGCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCa                                                                                                                            <  2:402028/149‑1 (MQ=255)
             aaGCTGTTTTCTACCTGACGGTAGTTCATCTCTGTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAg                                                                                                                           <  2:109485/149‑1 (MQ=255)
                   ttttCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTc                                                                                                                     >  2:226447/1‑149 (MQ=255)
                           cTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTAAGATTCTGCGCGCGCGGTGCATCGCGCAGGGCCTCCGCTTCCt                                                                                                             >  1:6148/1‑149 (MQ=255)
                             gACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGa                                                                                                           >  2:291984/1‑149 (MQ=255)
                              aCGGAAGACCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTCATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGAc                                                                                                          <  1:20656/149‑1 (MQ=255)
                                ggTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGc                                                                                                        >  1:153028/1‑149 (MQ=255)
                                ggTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCACGGGACATCGCGCAGTGCCTCCGCTTTCTGACGc                                                                                                        >  1:99743/1‑149 (MQ=255)
                                ggTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATAGATGTACTCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGTGCAGGGCCTTCGCTTCCTGgcgc                                                                                                        >  2:16241/1‑149 (MQ=255)
                                 gTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGcc                                                                                                       >  1:58897/1‑149 (MQ=255)
                                  tAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCa                                                                                                      >  1:188588/1‑149 (MQ=255)
                                    gATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACt                                                                                                    >  1:212116/1‑149 (MQ=255)
                                    gATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACt                                                                                                    >  1:400568/1‑149 (MQ=255)
                                     atcatcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTGATCCTGATCCAGCTCGATTTTGTGTTTCTTTGCCCGACCAATCAGATTCCCCTTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGGCGCCCCtc                                                                                                   >  2:576/1‑149 (MQ=255)
                                     atcatcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGACCTCCGCTTCCTGACGCCACtc                                                                                                   >  1:159764/1‑149 (MQ=255)
                                     atcatcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCACCCGCAGTACATCGCGCGGGGCCTCCGCTTCCTGACGCCACtc                                                                                                   >  1:328323/1‑149 (MQ=255)
                                      tcatcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtca                                                                                                  >  1:258651/1‑149 (MQ=255)
                                       catcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtcat                                                                                                 >  2:341973/1‑149 (MQ=255)
                                       catcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtcat                                                                                                 <  1:54050/149‑1 (MQ=255)
                                        atcTCTTTCCCTGCGACCGGTAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtcatc                                                                                                <  1:90436/149‑1 (MQ=255)
                                        atcTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtcatc                                                                                                <  1:409094/149‑1 (MQ=255)
                                         tctcTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACtcatca                                                                                               >  2:51633/1‑149 (MQ=255)
                                           tctTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCatcatc                                                                                             <  1:226447/149‑1 (MQ=255)
                                           tctTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCatcatc                                                                                             <  2:382786/149‑1 (MQ=255)
                                              ttCCGTGCTAACGGCAGTCGTTCATGGATCTAATCCTGATCCAGCTCGATTTTGGTTTTTCATGCACGGCCAGACGGGTTCACTTTCAGATTCTGTGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAg                                                                                          <  2:362900/149‑1 (MQ=255)
                                              ttCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAg                                                                                          <  1:270527/149‑1 (MQ=255)
                                              ttCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGAGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAg                                                                                          <  1:190037/149‑1 (MQ=255)
                                               tCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGc                                                                                         >  1:123111/1‑149 (MQ=255)
                                                cccTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGct                                                                                        >  1:233995/1‑149 (MQ=255)
                                                  cTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGcttc                                                                                      >  2:242793/1‑149 (MQ=255)
                                                  cTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGcttc                                                                                      <  1:103750/149‑1 (MQ=255)
                                                  cTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTGTGTTTTCGTTGCCCGACCAAGCAGAGGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGcttc                                                                                      <  2:115882/149‑1 (MQ=255)
                                                   tGCGACCGGCAGACGTTCATCGCTCTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGcttct                                                                                     >  1:84329/1‑149 (MQ=255)
                                                    gCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGcttctt                                                                                    <  2:123111/149‑1 (MQ=255)
                                                             aGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGGCGCCACTCATCACTCGGCTCCTTCTGGTATAg                                                                           >  1:31842/1‑149 (MQ=255)
                                                             aGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAg                                                                           >  1:382191/1‑149 (MQ=255)
                                                             aGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAg                                                                           <  2:153028/149‑1 (MQ=255)
                                                             aGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTCCTTATGGTATAg                                                                           >  1:295540/1‑149 (MQ=255)
                                                             aGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTAGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAg                                                                           >  2:72482/1‑149 (MQ=255)
                                                                 gTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAgg                                                                       <  1:51633/149‑1 (MQ=255)
                                                                 gTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAgg                                                                       <  2:382191/149‑1 (MQ=255)
                                                                 gTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCAATCACTGGCCTCTTCCTGACGCCCCCCATCCTCCAGCTTCTTCTCGTATAGCAgg                                                                       >  1:12222/1‑149 (MQ=255)
                                                                 gTTCATCGATGTAACCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAgg                                                                       <  1:50559/149‑1 (MQ=255)
                                                                 gTTCATCGATGGAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAgg                                                                       <  1:232309/149‑1 (MQ=255)
                                                                   tCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGa                                                                     <  2:400568/149‑1 (MQ=255)
                                                                     aTCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGCCCAATCAGATGCACATTCAGAATCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGaaa                                                                   >  2:229189/1‑149 (MQ=255)
                                                                     aTCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGaaa                                                                   >  1:19897/1‑149 (MQ=255)
                                                                          tGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCCCTCATCATCCAGCTTCTTATGGTATAGCAGGGCAaccacc                                                              >  1:150513/1‑149 (MQ=255)
                                                                              acccTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCt                                                          <  2:19897/147‑1 (MQ=255)
                                                                                gctgttacAGCTGGATTTTGGTTGTCGTTTCCCGATCAATCAGAGGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGTCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGa                                                        <  2:29880/142‑1 (MQ=255)
                                                                                 cTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGAt                                                       <  2:58897/149‑1 (MQ=255)
                                                                                   aacgcAGCGCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTa                                                     <  2:212116/145‑1 (MQ=255)
                                                                                     tCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTGTAGCAGGGAAACCACCGCCTGATTACt                                                   <  2:261050/149‑1 (MQ=255)
                                                                                     tCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACt                                                   <  2:233995/149‑1 (MQ=255)
                                                                                          cTCGATTTTGGTTTTCGTTGCCCGACCAATCAGTTGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGTCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTCTGGTATAGCAGTGAAACCACCGCCTGATTACTCAgtg                                              <  1:128773/149‑1 (MQ=255)
                                                                                          cTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGCTTATTCTgtt                                              >  1:391789/1‑148 (MQ=255)
                                                                                           tCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCGGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAgggt                                             >  1:11049/1‑149 (MQ=255)
                                                                                               ttttGGTTTTCGTTGACCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCCCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACAGCCTCATTACTCACTGTAGTg                                         >  2:156974/1‑149 (MQ=255)
                                                                                                 ttgttgttCGTTGCCCGGCCAATCAGATGCACATTCGGATTCTGCGCGCGCAGCGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCGTATGGTATAGCAGGGAAACCACCGCCTGATGACTCAGTGTAGTGAg                                       <  2:154447/143‑1 (MQ=255)
                                                                                                     ttttCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTaa                                   >  1:175322/1‑149 (MQ=255)
                                                                                                     ttttCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTaa                                   <  1:242793/149‑1 (MQ=255)
                                                                                                     tcctccatGCCCGACCAATCAAATGCACATACAGATTCCGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACCCCACTCATCATCCAGCTTCTTATGGCAGATCAGGAAAACCACCGCCTGATTACTCAGTGTAGTGAGGTaa                                   <  1:16241/142‑1 (MQ=255)
                                                                                                          gTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGa                                                                                                           >  1:387537/1‑72 (MQ=255)
                                                                                                          gTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGa                                                                                                           <  2:387537/72‑1 (MQ=255)
                                                                                                            tGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGACACCATTACGGTAGTACTCAGTGTAGTGAGGTAATCAATCt                            <  1:314175/149‑1 (MQ=255)
                                                                                                            ggCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCt                            <  1:222251/148‑1 (MQ=255)
                                                                                                             gCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTg                           <  1:72482/149‑1 (MQ=255)
                                                                                                                cGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGaa                        <  2:175322/149‑1 (MQ=255)
                                                                                                                    cAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGaacaac                    <  2:188588/149‑1 (MQ=255)
                                                                                                                     aaTCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGGGTAGTGAGGTAATCAATCTGGAACACCt                   >  1:71490/1‑149 (MQ=255)
                                                                                                                      aTCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACt                                                   >  1:221607/1‑116 (MQ=255)
                                                                                                                      aTCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACt                                                   <  2:221607/116‑1 (MQ=255)
                                                                                                                       tgaGATGCACGTTGAGATTCTGTGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTtg                 <  2:185003/147‑1 (MQ=255)
                                                                                                                       tCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGGAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTtg                 <  2:376794/149‑1 (MQ=255)
                                                                                                                        cAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTtgt                <  1:417858/149‑1 (MQ=255)
                                                                                                                         aGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTtgtg               <  1:291984/149‑1 (MQ=255)
                                                                                                                           aTGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGgc             <  1:341973/149‑1 (MQ=255)
                                                                                                                               acaTTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTTAGGTAATCAATCTGGAACAACTTGTTgcgccg         >  2:405459/1‑147 (MQ=255)
                                                                                                                               acaTTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAg         >  1:352100/1‑149 (MQ=255)
                                                                                                                               acaTTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATATGGAACAACTTGTGGCGCAg         >  1:118359/1‑149 (MQ=255)
                                                                                                                                 aTTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTGATCAATCTGGGACAACTTGTGGCGCAGaa       >  1:67153/1‑149 (MQ=255)
                                                                                                                                     aGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGGCGCCACTCATCATCCACCTTCTTATGGGATAGCAGGCAACCCACCGCCTGATTACTCAGAGTAGTGCGGTAATCAAACTCGACCAACTACTGCCGCAGAACggc   >  2:227744/1‑148 (MQ=255)
                                                                                                                                      gATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGa  <  1:178938/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                          
GTTCGGCTGGGTAAAGCTGTTTTCTACCTGACGGTAGATCATCTCTTTCCCTGCGACCGGCAGACGTTCATCGATGTAATCCTGATCCAGCTCGATTTTGGTTTTCGTTGCCCGACCAATCAGATGCACATTCAGATTCTGCGCGCGCAGTGCATCGCGCAGGGCCTCCGCTTCCTGACGCCACTCATCATCCAGCTTCTTATGGTATAGCAGGGAAACCACCGCCTGATTACTCAGTGTAGTGAGGTAATCAATCTGGAACAACTTGTGGCGCAGAACGGGA  >  NC_000913_3_pae_tpiA/4162611‑4162893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.