| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1483730 | 3 (0.060) | 73 (1.560) | 47/282 | 0.1 | 96.0% | coding (670/3903 nt) | hrpA | putative ATP‑dependent helicase |
| ? | NC_000913_3_pae_tpiA | = 2290113 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system | |||||
Only 100 of 118 total aligned reads displayed.
CGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGA > NC_000913_3_pae_tpiA/1483582‑1483878 | aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTaa < 1:708637‑M1/5‑1 (MQ=255) gACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAg > 2:595765‑M1/1‑148 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTaaa > 2:289827‑M1/144‑149 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTaaa > 1:591443‑M1/144‑149 (MQ=255) actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgcgagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTaaa > 1:729141‑M1/144‑149 (MQ=255) gggataacgccctaaatggcgaagaaaccgtctaaataggctgattcaaggcatttacgggagaaaaaatccgctcaaacactaagaaatgaaaggactgagtcagccgagaagaatctccccgcttattcgcaccttcCCTAAAAATc > 1:238029‑M1/140‑149 (MQ=255) tATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaagg < 1:204244‑M1/149‑7 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggt < 2:63501‑M1/149‑8 (MQ=255) aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTAt < 2:461451‑M1/15‑1 (MQ=255) gctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaa < 1:591887‑M1/149‑13 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctaaCCTAAAAATCATTATCAc > 2:708469‑M1/132‑149 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactacgtcagccgagaagaatttccccgcttattcgcaccttcCCTAACAATAATTatccc < 2:645781‑M1/18‑3 (MQ=255) ccttaaatggcgaagacacggtataaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACt > 1:290491‑M1/131‑149 (MQ=255) ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactcagtcagcttataagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTc > 1:643241‑M1/129‑149 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagt < 2:668603‑M1/149‑18 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtcc < 2:49229‑M1/149‑20 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtcc < 1:137747‑M1/149‑20 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtcc < 2:49250‑M1/149‑20 (MQ=255) aTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctg > 1:591330‑M1/1‑127 (MQ=255) gCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatg > 1:731124‑M1/1‑122 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatga > 1:54616‑M1/1‑121 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaag > 1:472772‑M1/1‑121 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaag < 2:472772‑M1/126‑6 (MQ=255) aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattttcccgcttattcgcaccttcCCTAAAAATCATTATGACTTCCGCGCCTATCGAcc < 1:273059‑M1/35‑1 (MQ=255) aGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgaga < 2:256945‑M1/149‑31 (MQ=255) gACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaggtccctgatatgagat > 1:618861‑M1/1‑118 (MQ=255) aCCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatc < 2:76533‑M1/149‑33 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcaccgattattcgcaccttcCCTAAAAATCATTATCACTTCCCCGACTATCGACTCGGa < 2:359383‑M1/39‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAg < 2:559941‑M1/116‑2 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAg > 1:559941‑M1/1‑115 (MQ=255) gctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATATTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcaaacaagtccctgatatgagatcaggtttg > 1:117037‑M1/1‑110 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatggttgtctt > 1:124786‑M1/1‑106 (MQ=255) gCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAgggacgggcgaacaagtccctcatatgagatcatgtttatcatct > 1:562128‑M1/1‑104 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc < 1:453847‑M1/53‑1 (MQ=255) tACGACACTATCATTATTGACGAAGCGCAGGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTGTTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgggg > 1:100705‑M1/1‑100 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttatcatctggag > 2:285011‑M1/1‑100 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt < 1:165724‑M1/57‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaaggaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:425942‑M1/93‑149 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGATTATCGACCCGGACCGCTTTTCGCGCCCCttt < 1:506098‑M1/58‑1 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:223887‑M1/63‑1 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagatca > 2:65349‑M1/1‑90 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:558678‑M1/149‑63 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:595765‑M1/149‑63 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgcgatcatgtttgtcatctggagccatagaacagggttc > 1:763657‑M1/1‑84 (MQ=255) tggcgaaGCGGACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 2:593301‑M1/146‑67 (MQ=255) agaaaaaatcggctaaaacctctagtaagaaaattactgagtcagccgagaaggatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGa > 1:148360‑M1/79‑149 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTCTAATAATGCGCCGatt > 1:712225‑M1/77‑149 (MQ=255) aCGAAGCGGACGAACGCAGCCGTAATATCGATTTTTTGCTCGGGTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaaccgggttcatc < 2:324584‑M1/149‑69 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 1:420240‑M1/149‑71 (MQ=255) aaatcggttcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCGAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt > 1:344440‑M1/74‑149 (MQ=255) aGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:731124‑M1/149‑73 (MQ=255) aGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:514082‑M1/149‑73 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATTACTTCCGCGACTATAGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa > 1:720225‑M1/71‑149 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:188228‑M1/146‑73 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:188228‑M1/1‑74 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcctgagtcatca > 1:367887‑M1/1‑70 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca > 1:662415‑M1/1‑70 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTcc < 1:90542‑M1/85‑1 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGt < 2:600268‑M1/88‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAc > 2:210680‑M1/57‑149 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc > 1:237091‑M1/1‑60 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:122658‑M1/93‑39 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 2:122658‑M1/1‑55 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaa > 2:398063‑M1/1‑51 (MQ=255) tttttGCTCGGTTATGTGAAAGAGTTGCTGCCGCGGCGTCGTGACCTAAggaaggtgcgaacaagcccctgatatgagatcatgtttgtcatctggagccatagaacggggttcatcatgagtcatcaacttacctccgccgacagtga < 2:371217‑M1/149‑101 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGaa > 1:355369‑M1/44‑149 (MQ=255) agtcagccgagaagcatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTgc > 1:803570‑M1/40‑149 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTacgc < 2:116330‑M1/112‑1 (MQ=255) cGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagggaacaacttaccttcgccgacagtgaattcagca < 2:790031‑M1/149‑109 (MQ=255) gagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATc > 2:168077‑M1/32‑62 (MQ=255) gagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATc < 1:168077‑M1/31‑1 (MQ=255) gagaagaatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGc < 1:3204‑M1/118‑1 (MQ=255) aatttccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGAtt > 1:115222‑M1/26‑149 (MQ=255) aaGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 1:432896‑M1/136‑107 (MQ=255) aaGAGTTGCTGCCGCGGCGTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:432896‑M1/1‑30 (MQ=255) tccccgcttattcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGAttgttg > 2:165724‑M1/22‑149 (MQ=255) gTTGCTGCCGCGGCGTCCTGACCTAAggaagatgcgaacaagtccctgatatgagatcatgtttgtcatctggggccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattgagcagaccgcgccttcagc > 2:335905‑M1/1‑26 (MQ=255) gcggggTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgtaatggaattcagcagtaagcgccgtcagaccagaaaag < 2:382776‑M1/149‑133 (MQ=255) tcgcaccttcCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGAt > 1:441100‑M1/11‑149 (MQ=255) ggcgTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag > 1:64850‑M1/1‑15 (MQ=255) cgTCCTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat < 2:662415‑M1/149‑137 (MQ=255) accttcCCTAAAAATCATTACCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTGGGACCTATCCGGTGGAAGTGCGCTATAGCCCGATTGTTGAATAAGCCGATGaca < 1:378584‑M1/143‑1 (MQ=255) cTGACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 2:119150‑M1/1‑9 (MQ=255) gACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagtgttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 2:640544‑M1/149‑143 (MQ=255) gACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaacagcaaaaatattttctt < 2:214469‑M1/149‑143 (MQ=255) aCCTAAggaaggtgcgaaaaagtccctgatatgagatcatggttgtcatctagagccatagaacaggattcatcatgagtcatcaacttaccgtcggcgacagtgaattcagcagtaagcgccgtcagaccacaaaacagattttctta > 2:585425‑M1/1‑6 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 1:251910‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:402033‑M1/149‑146 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcacgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:272132‑M1/149‑146 (MQ=255) cTAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctgatgcgatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:395209‑M1/149‑146 (MQ=255) cTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAgcg > 2:796143/1‑149 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc > 1:240634‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc < 2:799454‑M1/149‑147 (MQ=255) aaggaagttgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc < 1:15618‑M1/149‑148 (MQ=255) aaggaaggtgcgaaacagtcccggttatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattgtcttgtccc < 2:13749‑M1/149‑148 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtccgaccataaaagacattttcttgtcccg > 2:336134‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 1:379027‑M1/149‑149 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 1:621234‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 2:49819‑M1/1‑1 (MQ=255) aaaaTCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCTCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGCCACCGCGCGCGa > 1:162930/1‑149 (MQ=255) | CGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGA > NC_000913_3_pae_tpiA/1483582‑1483878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |