Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_pae_tpiA 2039440 2039508 69 2 [1] [1] 2 [yedY] [yedY]

AACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAAC  >  NC_000913_3_pae_tpiA/2039304‑2039456
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aaCGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACATATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCACTGCTACTGTTAGGGAGGAAACTCCCTGCCAGATTAACAGTAAAc                   >  2:209758/1‑136 (MQ=255)
                 gCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTacc  >  2:134731/1‑134 (MQ=255)
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AACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAATGCATAAATATGTAAAAGCAGATCTCTGCTACTGTTAGGGAGGACACTCCCTGACAGATTAACAGTAAACGGCTCTTGCTGGCTAAC  >  NC_000913_3_pae_tpiA/2039304‑2039456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: