Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_tpiA	3803830	3803883	54	3 [1]	[1] 2	waaB	lipopolysaccharide 1,6‑galactosyltransferase; UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase

CTGGTTGGTACTCCTGAAGCCATTTACTTAGAGCATGAATATGTTTCGCCCGACGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGAC  >  NC_000913_3_pae_tpiA/3803882‑3804019   |                                                                                                                                        cTGGTTGGTACTCCTGAAGCCATTTACTTAGAGCATGAATATGTTTCGCCCGACGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTTTCATTAcc    >  2:7560/1‑135 (MQ=255)   ggttggtACTCCTGAAGCCATTTACTTAGAGCATGAATATGTTTCGCCCGACGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTaacaa  >  1:257114/1‑132 (MQ=255)   |                                                                                                                                        CTGGTTGGTACTCCTGAAGCCATTTACTTAGAGCATGAATATGTTTCGCCCGACGCAAAAAACCTAAACGAATATTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGAC  >  NC_000913_3_pae_tpiA/3803882‑3804019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑