New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 3087889NA (NA)7 (0.130) 7/264 6.5 NA intergenic (+29/‑395) metK/galP S‑adenosylmethionine synthetase/D‑galactose transporter
?NC_000913_3_pae_tpiA = 3087894 NA (NA)intergenic (+34/‑390) metK/galP S‑adenosylmethionine synthetase/D‑galactose transporter
Rejected: Coverage evenness skew score above cutoff.

TGCACCCGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTG  >  NC_000913_3_pae_tpiA/3087748‑3088042
                                                                                                                                                   |                                                                                                                                                    
tgcACCCGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCTCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCgcgc                                                                                                                                                    >  1:86438/1‑149 (MQ=255)
    cccGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGc                                                                                                                                                >  1:7817/1‑149 (MQ=255)
     ccGATCTACAAAGAAAACGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGcc                                                                                                                                               >  1:919123/1‑149 (MQ=255)
        aTCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCttt                                                                                                                                            >  2:367974/1‑149 (MQ=255)
          cTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCttttt                                                                                                                                          <  1:541903/149‑1 (MQ=255)
           tACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTc                                                                                                                                         >  1:714670/1‑149 (MQ=255)
                  aaaCCACAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGa                                                                                                                                  >  2:913402/1‑149 (MQ=255)
                      cGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAgg                                                                                                                              >  1:613959/1‑149 (MQ=255)
                                ggTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGATGCCGCTCTTGTGTATTCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCAcgcc                                                                                                                    <  2:905400/149‑1 (MQ=255)
                                  tCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCAcgccgc                                                                                                                  >  1:863892/1‑149 (MQ=255)
                                          gtcctaaaCATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCGGAATTAATCTTTCTTCCCCTGCGTTCAAAAGCCAGCCGCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCa                                                                                                          <  1:149600/143‑1 (MQ=255)
                                              tGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaac                                                                                                      >  1:185019/1‑148 (MQ=255)
                                               gAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCaaaaat                                                                                                     >  2:701990/1‑148 (MQ=255)
                                                aaCATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTTGATAGGCGTTCACGCCGCTTCCGGCaaacgac                                                                                                    >  2:324017/1‑145 (MQ=255)
                                                   aTTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccg                                                                                                 >  1:585815/1‑149 (MQ=255)
                                                        ccGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgcccgc                                                                                            >  1:719911/1‑149 (MQ=255)
                                                         cgggggAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTCTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGca                                                                                           <  1:413427/146‑1 (MQ=255)
                                                              gAAAAAACCGACAAAGCGCAGCAGATGCGAGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGACAAAAACAAAAAAAAAACCGCCCGCACAATa                                                                                      <  2:7817/149‑1 (MQ=255)
                                                               aaaaaaCCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATaa                                                                                     >  1:380206/1‑149 (MQ=255)
                                                                 ataaCCGACAAAGCGCAGCTCGCGGACGATTCTGCCGGTCTGAAGTCATCTTTCTTCACCTGCGTTCAAAGGCTAGCCTCGCGTTGGCCTTTTTCATTTGGATAGGCCTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcg                                                                                   <  2:979354/147‑2 (MQ=255)
                                                                  aaaCCGACAAAGCGCAGCTGCTGCGCGATGCTGACGATCCGTATTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAAcat                                                                                  >  1:514789/1‑149 (MQ=255)
                                                                          aaaGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttcttc                                                                          >  1:570079/1‑149 (MQ=255)
                                                                          aaaGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAttcttc                                                                          >  1:509025/1‑149 (MQ=255)
                                                                            aGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCt                                                                        <  1:367974/149‑1 (MQ=255)
                                                                                 aGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCa                                                                   <  1:525536/149‑1 (MQ=255)
                                                                                    tgctgcGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACCATAACATCATTCTTCCTGATCACga                                                                >  1:620241/1‑148 (MQ=255)
                                                                                       tgcGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTc                                                             >  1:557825/1‑149 (MQ=255)
                                                                                        gcgcGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCa                                                            >  2:413973/1‑149 (MQ=255)
                                                                                            gATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAtt                                                                              <  1:633136/127‑1 (MQ=255)
                                                                                            gATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCAtt                                                                              >  2:633136/1‑127 (MQ=255)
                                                                                            gATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGc                                                        >  1:900871/1‑149 (MQ=255)
                                                                                                ctgcCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGAt                                                    >  2:1052712/1‑149 (MQ=255)
                                                                                                   ccGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTat                                                 >  2:963515/1‑149 (MQ=255)
                                                                                                    acgTCTGAAGTAATCTTTCTTCAACTGCTTCAAACGGGCAGCCTCGCTCCGGCCTTTTTCTTTTGGCTATGCGTTCAAGACATAAACAGAAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTatc                                                <  2:607737/147‑1 (MQ=255)
                                                                                                           acgTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACaa                                         <  1:599001/147‑1 (MQ=255)
                                                                                                           aaGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgccc                                                                                              >  1:165153/1‑96 (MQ=255)
                                                                                                           aaGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgccc                                                                                              <  2:165153/96‑1 (MQ=255)
                                                                                                           aaGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACaa                                         >  1:1034567/1‑149 (MQ=255)
                                                                                                             gTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCTTCGCGCTGGCCTTTTGCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACt                                       <  2:191338/149‑1 (MQ=255)
                                                                                                                aTCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGaa                                    <  1:963515/149‑1 (MQ=255)
                                                                                                                 tctttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTAACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGaca                                   >  1:352880/1‑147 (MQ=255)
                                                                                                                  ctttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAAc                                  <  1:1052712/149‑1 (MQ=255)
                                                                                                                   tttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgc                                                                                                <  2:276739/86‑1 (MQ=255)
                                                                                                                   tttcttCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAAccgc                                                                                                >  1:276739/1‑86 (MQ=255)
                                                                                                                     tcttcGCCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCAGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATTATCACAACTGAAACCGa                               <  2:95717/149‑1 (MQ=255)
                                                                                                                     tcttcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGa                               <  2:157608/149‑1 (MQ=255)
                                                                                                                     tcttcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGa                               >  2:625247/1‑149 (MQ=255)
                                                                                                                     tcttcACCTGCGTGCAAAGGCCAGCCTCGCGCTGGCCTTTTGCTTTTGGATAGGCGTTCACGCCGCATCCGGAAAAAAAACCGCCCGCACAATAACATCCTTGTTCCTGACCACGTGTCACCGCAGATTATTATCACAACTGAAACCGa                               <  2:95849/149‑1 (MQ=255)
                                                                                                                        tcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTa                            <  1:596419/149‑1 (MQ=255)
                                                                                                                        tcACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGAGAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTa                            <  1:412066/149‑1 (MQ=255)
                                                                                                                          aCCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTaca                          <  1:835328/149‑1 (MQ=255)
                                                                                                                            cTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCCGATTATCATCACAACTGAACCCGATTACacc                        >  2:257840/1‑149 (MQ=255)
                                                                                                                            cTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTaaccc                        >  1:451526/1‑145 (MQ=255)
                                                                                                                             tGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACacca                       >  2:543899/1‑149 (MQ=255)
                                                                                                                               cGTTCAAAGGCCACCCTCGCGCTGGCCTTTTTCTTTGGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACaccaac                     <  1:333759/149‑1 (MQ=255)
                                                                                                                                    caaGGCCACCCTCGCGCTGGCCGTTTGCGTCTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCacaa                <  1:547514/148‑1 (MQ=255)
                                                                                                                                              ccTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATCACATCATTCTTCCTGATCACGTTTCACAGCAGATTATCATCACAACTGCAACCGATTACACCAACCaccacaccccaag       >  2:1023370/1‑142 (MQ=255)
                                                                                                                                              ccTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACCGACaaaa       >  1:876739/1‑148 (MQ=255)
                                                                                                                                                tCGCGCTGGCCTTTTTCTTTTTTTTATGCATTAAAGCCCTATCCGGCAAAACAATCGCCCGCACAATAAATTACTTCTTACTGATCCCGTTTCACCGCAGATCATAATTACTACTATATCCGATTCCACCCAGCCCAACAGACACAGAt     >  2:923058/1‑149 (MQ=255)
                                                                                                                                                   cgcTGGCCTTTTTCTTTTGGGTAGGCGATCACGGCGCATCCGGCAAAAAAACCGCCCGCACAATAACACCATGCTCCCTGATCACGTTTCACCGCAGATTATCATCACACCTGAAACCGATTACACCAACCACAACACACAAAGATTTg  <  1:192651/149‑1 (MQ=255)
                                                                                                                                                   cgcTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCATGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTg  <  1:913402/149‑1 (MQ=255)
                                                                                                                                                   cgcTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTg  <  2:570079/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGCACCCGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAATCTTTCTTCACCTGCGTTCAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTG  >  NC_000913_3_pae_tpiA/3087748‑3088042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.