| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_tpiA | 3,440,923 | C→T | G36D (GGC→GAC) | rpoA ← | RNA polymerase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_tpiA | 3,440,923 | 0 | C | T | 97.7% | 397.9 / NA | 128 | G36D (GGC→GAC) | rpoA | RNA polymerase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (71/54); minor base G (1/2); total (72/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 128 total aligned reads displayed.
GGTTGAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAA > NC_000913_3_pae_tpiA/3440777‑3441067 | ggTTGAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCa > 2:861139/1‑149 (MQ=255) gTTGAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCaa > 1:1440349/1‑149 (MQ=255) gTTGAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCaa > 1:795226/1‑149 (MQ=255) aGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAACGTATGGTCAAAGcc > 1:1360192/1‑149 (MQ=255) cAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCAc > 2:234739/1‑149 (MQ=255) aGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACg > 1:544616/1‑149 (MQ=255) tttCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGctct > 2:456930/1‑149 (MQ=255) cAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAg > 2:772017/1‑149 (MQ=255) ggATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGc < 1:456930/149‑1 (MQ=255) ggATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGc < 1:1257329/149‑1 (MQ=255) tCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCCACCCGGCATCGATGCGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCACCGCCCTAACGGCTCacg > 2:166295/1‑147 (MQ=255) tCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCCGAGTATGGTCAAAGCCACGCTCTAAAGGCTCagg > 1:1156884/1‑147 (MQ=255) ttCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAggg > 2:1147/1‑149 (MQ=255) ccTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTCCACCATCAATCTCAGCCTCGGTCACCGTGCAGCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCGGCGTATGGTCAAAGGCACGCTCTAAAAGCTCTAggggc > 2:1033372/1‑147 (MQ=255) ccTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTc < 2:544616/149‑1 (MQ=255) tGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGCTGAGATCAGAATACGAAATCGTGTGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCAc > 1:273538/1‑149 (MQ=255) gAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCAcc < 1:1147/149‑1 (MQ=255) aaCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCGAGGGTCCCCt > 1:908286/1‑149 (MQ=255) gCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCCCCACGAAACTGGCCACCGATGAGACTGGATTACGTCGCAGTGCGTTACCCAGAGGATGGTCAAAGCCAGGCCCAAAAGGCTCAAGGGACACCTTgg > 1:1065633/1‑149 (MQ=255) cttcttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCCCGCTCTAACGGCTCAAGGGTCACCTTGgcg > 1:30249/1‑149 (MQ=255) cttcttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACGTTGgcg > 2:1432045/1‑149 (MQ=255) cttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAAGACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCGTGgcgtgc < 1:568296/149‑1 (MQ=255) tttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGgcgtgcg > 1:661203/1‑149 (MQ=255) tttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCGCTAAAGGCTCAAGGGTCACCTTGgcgtgcg > 1:450173/1‑149 (MQ=255) tGCTGTACTCATGTAGTACACCATCACTCGCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGaa < 2:520527/149‑1 (MQ=255) tGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGaa < 1:234739/149‑1 (MQ=255) ggCTGGACTCATGTAGTACATCATCGATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATAAGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGaa < 2:728262/148‑1 (MQ=255) gCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGaaa > 1:546964/1‑148 (MQ=255) gTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTTACCTTGGCGTGCGTCGAACTCa > 1:1029639/1‑149 (MQ=255) tACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCAc < 2:727167/149‑1 (MQ=255) tACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCAc > 2:302067/1‑149 (MQ=255) cTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCACAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACtt > 2:1283670/1‑149 (MQ=255) tCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTCTGGTCAGAGCCACGCTCGAAAGGCCCAAGGGCCACCTTGCCGTGCGTCGACCTCCCtcg > 2:151565/1‑147 (MQ=255) ctgtgGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑Ct > 2:1097798/2‑149 (MQ=255) aTGTAGTACACCATCAATCTCACCCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCCGTGCGTTACCCAGAGTCTGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGGGCGTCGCACTCACTTA‑Ct > 2:717334/1‑149 (MQ=255) gtagtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCg > 1:179329/1‑149 (MQ=255) tagtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCCCTAAAGGCCCAAGGGTCACCTTGGCGTGCGTCGAACTCCCTTC‑CTcca > 1:545809/1‑147 (MQ=255) agtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGat < 1:1263801/149‑1 (MQ=255) taCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGatat > 1:1045630/1‑149 (MQ=255) cATCAATCTCAACCTCGGTCACCGCGCCACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAAcc < 1:384777/149‑1 (MQ=255) cATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAAcc > 1:897635/1‑149 (MQ=255) aTCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCa < 2:179329/149‑1 (MQ=255) aTCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCCAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATccacca > 2:18235/1‑149 (MQ=255) aTCAATCTCAACCTAGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCa > 1:1251283/1‑149 (MQ=255) tctcAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGacgc > 1:1083212/1‑149 (MQ=255) tcAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGc > 1:1337042/1‑93 (MQ=255) tcAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGc < 2:1337042/93‑1 (MQ=255) caccgtCGGTACCCGGGCAACCCGGCATCGATACGAGCCGAATCCGGTCCCGTGCGTTCCCCAGAGTATCGTCAATCCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCCTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGt < 2:829113/144‑1 (MQ=255) aCCTCGGTGACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGttt < 2:917903/149‑1 (MQ=255) tCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAg > 1:1113196/1‑149 (MQ=255) tCGGGCACCGCGTAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCCCGCTCAAAAGGCTCAGAGGTCACCGTGGCGTGCCTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAg < 2:888090/149‑1 (MQ=255) cgTCACCGCGCAGCCCGGCATCGAGGAGAGCAGAATAAGGCGCAGTGCGTTCCCCAGAGTATGGTCAAAGACACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGaa < 2:303411/148‑1 (MQ=255) ccGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAActct > 1:1005365/1‑149 (MQ=255) gggccaCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGt < 2:187471/144‑1 (MQ=255) gcgcAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCGCAAGGGTCACCTTGGGTGGCGGCTAACTCGCTTG‑CTCGGTATTAAGCAGGCGCGAGTTTAGAAActcggg > 1:1382945/1‑146 (MQ=255) cgcAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTc < 1:1027376/149‑1 (MQ=255) aaCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTcaca < 1:481214/149‑1 (MQ=255) tccGGCATCGAGGAGAGCAGAATACGGCGCAGTGCGCTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCATTTT‑CTCGATATCGACCAGGCGCGGTTTTAGAAACTCTGTCACAGa < 1:1144163/148‑1 (MQ=255) cccGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGa > 1:1058204/1‑149 (MQ=255) ccGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGaa > 2:491899/1‑149 (MQ=255) cGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTa > 1:1291241/1‑131 (MQ=255) cGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTa < 2:1291241/131‑1 (MQ=255) caacGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCt < 1:302067/146‑1 (MQ=255) cATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTTACTGAACCCt > 1:58672/1‑149 (MQ=255) cATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCt < 2:1440349/149‑1 (MQ=255) cGATGAGAGCAGAATACGGCGCAGTGCGTTACCATGAGTATGGTTGTCGCCGAAGAAACCGTACTCGAGGGTTAACTTGGAGTGCGTCGAAGTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCa < 2:1029639/149‑1 (MQ=255) tGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCCCCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCGCAGAACCCTGCATtg > 1:692645/1‑149 (MQ=255) agagCAGAATACGGCGCAGTGCGTTACCCAGATTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtgtg < 2:1112401/149‑1 (MQ=255) agCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCCCTTG‑CCCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTc < 1:772017/149‑1 (MQ=255) agCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTc > 1:164959/1‑149 (MQ=255) agCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTc < 2:1045630/149‑1 (MQ=255) cAGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCct < 2:1001357/149‑1 (MQ=255) aGAATACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCctc > 2:353365/1‑149 (MQ=255) aGAATACGGCGCAGGGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCctc < 2:795226/149‑1 (MQ=255) tACGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTATCCTCTCtt > 2:876584/1‑149 (MQ=255) tACGGCGCAGTACGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCCTTGTGTCCTCTCtt > 1:886302/1‑149 (MQ=255) aCGGCGCAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCGCTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCttt < 1:1102093/149‑1 (MQ=255) aCGGCGCAGTGCGTTACCCAGAGTACGGGCATAGCCACGCCCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCttt < 1:1194949/149‑1 (MQ=255) ggCGCAGTGCCTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTTACAGAACCCTGCATTGTGTCCTCTCTTTgg < 1:857066/149‑1 (MQ=255) gcgcAGTGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGt < 2:407066/149‑1 (MQ=255) tGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCTCGGTTTTAGAAACTCTGTCACAGCACCCTGCATTGTCTCCTCTCTTTGGTACTAAg > 2:618035/1‑149 (MQ=255) tGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAg > 1:721916/1‑149 (MQ=255) tGCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCCCTTTGGTACtcat > 2:492419/1‑146 (MQ=255) gCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGc < 2:995761/149‑1 (MQ=255) gCGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACATGGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGc > 1:1005498/1‑149 (MQ=255) gCGTGACGCAGAGTATTGGTAAGGTCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGc < 2:466306/149‑1 (MQ=255) cGTTACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGACCCCTGCCTTGTGTCTTCCCTTGGGTACTAAgat > 1:1211499/1‑147 (MQ=255) gttgcgcAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACGCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCtt < 2:1288839/143‑1 (MQ=255) ttACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCttt > 2:733390/1‑149 (MQ=255) ttACCCAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATCGTGTCCTCTCTTTGGTACTAAGCttt > 2:954423/1‑149 (MQ=255) cccAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGt > 2:571051/1‑136 (MQ=255) ccAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCCCAGAACCCTGCCTTGTGTCCTCTCTTTGGTACTAAGCtttcatt > 1:583571/1‑145 (MQ=255) cAGAGTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAACGTTAAACATTTTGTCCTCTCTTTGGTACTAAGCTTTACTTg < 1:708508/149‑1 (MQ=255) gagTATGGTCAAAGCCACGGTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGa < 2:516604/149‑1 (MQ=255) gagTATGGTCAAAGCCACGCTCTTAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGa < 2:1020908/149‑1 (MQ=255) gagTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCTTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGa < 1:130133/149‑1 (MQ=255) gagTATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGa < 1:18235/149‑1 (MQ=255) tATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAActct > 1:801532/1‑95 (MQ=255) tATGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAActct < 2:801532/95‑1 (MQ=255) aTGGTCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCAATTGCCGCGA‑ATCAACCACGCTATGGGTGAGAAACTCTGTCACAGAACCCGCCATTGTGTCCTCTCTCTGGTACTAAGCTTTACTTGGAggca > 1:1421751/1‑146 (MQ=255) | GGTTGAGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTG‑CTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAA > NC_000913_3_pae_tpiA/3440777‑3441067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |