New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 254294NA (NA)92 (1.110) 63/284 0.3 NA coding (1423/1458 nt) pepD aminoacyl‑histidine dipeptidase (peptidase D)
?NC_000913_3_pae_tpiA 273955 = NA (NA)intergenic (+1/+146) ykfC/insH1 CP4‑6 prophage; conserved protein;Phage or Prophage Related/IS5 transposase and trans‑activator

ACGTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/254151‑254294
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  NC_000913_3_pae_tpiA/273955‑274102
                                                                                                                                                                                                                                                                                                    
ACGTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCGGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAG                                                                                                                                                 >  1:1203845/1‑149
  GTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAGTTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGT                                                                                                                                               >  2:1280120/1‑149
  GTGGCAACCCGCGACGGACATATACAGGGATGGCTTTTATCGAAGGATGATGAAGGGTGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCTCCGGAATTTCTTTCCGCCGTTCAGCAAGGGAAGGg                                                                                                                                               >  2:465314/1‑148
   TGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTG                                                                                                                                              >  2:820418/1‑149
    GGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGC                                                                                                                                             <  2:105669/149‑1
    GGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGC                                                                                                                                             <  2:415135/149‑1
       AACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGACTTTCTTTACGAAGTTGAGTCAGGGACGGTGAGAA                                                                                                                                          >  2:403088/1‑149
       AACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAA                                                                                                                                          >  1:1114577/1‑149
          CCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCATGGAAGGTGCGAATAc                                                                                                                                       >  2:1066842/1‑148
              aACGGACAATTACAGGGATGGCTTTTATCGAAGAAAAATAAAAAAAAAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGG                                                                                                                                   <  1:558688/148‑1
              GACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCGTCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCCGCAGTTCAGTCAGGCAAGGGGCGAATAAGCGG                                                                                                                                   >  2:1342098/1‑149
              GACGGACATTTACAGGGATGGCTGTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGG                                                                                                                                   <  2:504637/149‑1
               ACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGG                                                                                                                                  <  1:338042/149‑1
                 GGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCATTTCAGTCAGGGAAGTTACGAATAAGCGGGGA                                                                                                                                >  2:478182/1‑149
                 GGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGA                                                                                                                                >  1:570775/1‑149
                   ACATTTACCGGGATGGCTTTTATCGACGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGAAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAA                                                                                                                              <  1:887617/149‑1
                    CATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAAT                                                                                                                             >  1:181639/1‑149
                     ATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAACTT                                                                                                                            >  2:905364/1‑149
                       TTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCT                                                                                                                          >  2:1134294/1‑149
                        TACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGG                                                                                                                                 >  2:838118/1‑141
                        TACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGG                                                                                                                                 <  1:838118/141‑1
                         ACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTCCGAATAAGCGGGGAAATTCTTC                                                                                                                        >  1:116164/1‑149
                           cGGGATGGCTTTTATCCAAGGATAATGAAGGATGAAACTGCCGGACGGAGTGCGCACGGCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                                                                      <  1:42206/148‑1
                           AGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC                                                                                                                      >  2:396927/1‑149
                             GGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCag                                                                                                                    >  2:743309/1‑147
                                     TTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCA                                                                                                            <  1:1343463/149‑1
                                     TTTAGCGAAGGAGCATGAATGGTGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCA                                                                                                            <  2:227077/149‑1
                                      TTATCGAGGGATAAGGAAGGATGAAACTGCCGGAAGGTGATTAAACGCCAGCCGGCAGCTAGTTAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGTCTCAG                                                                                                           <  2:635273/149‑1
                                        ATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCCGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTC                                                                                                         <  1:896544/149‑1
                                        ATCAAAGGATAAGGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCAGCCGGCAGCAAAGCAAATAATTACTGCGCCGTAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTC                                                                                                         <  1:661658/149‑1
                                         TCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA                                                                                                        >  2:350527/1‑149
                                         TCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA                                                                                                        <  2:1047973/149‑1
                                               GATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCG                                                                                                                                    <  2:387370/115‑1
                                               GATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCG                                                                                                                                    >  1:387370/1‑115
                                                    TGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT                                                                                             >  1:715513/1‑149
                                                     GAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAATGTGCTAATAAGCGGGGAAATTCTTCTCGGCTGACTAAGTCATTTCATTTCTTC                                                                                            >  2:158152/1‑149
                                                           TGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT                                                                                      <  1:1329882/149‑1
                                                             AAACCGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTTACTCAGTCATTTCATTTCTTCATGTTTGA                                                                                    <  1:1224999/149‑1
                                                               ACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGC                                                                                  >  2:1430493/1‑149
                                                                CTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCC                                                                                 >  2:895294/1‑149
                                                                CTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTCCTTCATGTTTGAGtc                                                                                 >  2:119987/1‑147
                                                                    CGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATT                                                                             >  1:951589/1‑149
                                                                        AGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTT                                                                         >  1:669361/1‑149
                                                                         GGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTC                                                                        <  1:820418/149‑1
                                                                            GATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGACTTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC                                                                     >  2:1198114/1‑149
                                                                            GATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC                                                                     <  1:208669/149‑1
                                                                            GATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGAACAAACAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTTACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC                                                                     >  2:305247/1‑149
                                                                             ATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCT                                                                                                                       <  2:191132/98‑1
                                                                             ATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCT                                                                                                                       >  1:191132/1‑98
                                                                                  gcggCATCTGGCAGGAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATATGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAA                                                               <  2:975665/145‑1
                                                                                  ACGCCATCCGGCAGCAAAGCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAA                                                               <  1:886340/149‑1
                                                                                          CGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGCAAATTCTGCCCGGCTGACTCAGTAATTTAATTTCTTCATGGTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA                                                       <  2:1314236/149‑1
                                                                                            GCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATTTTTGAGCCGATTTTTTCTCCCGCAAATTACTTGAAT                                                     <  2:1345812/149‑1
                                                                                            GCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAT                                                     <  1:225838/149‑1
                                                                                              AGCAATTCAAATAATTACTTCTGCGGACTTTCTTCCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCCGGGTAATTCTTCTCGGCTGGCTCAGTCATTTCATTTTTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCc                                                   <  2:547851/149‑2
                                                                                               GCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAG                                                  <  2:341865/149‑1
                                                                                                CAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                 <  2:715513/149‑1
                                                                                                      AAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTT                                           >  1:672675/1‑149
                                                                                                      AAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGACTATct                                           >  1:778965/1‑147
                                                                                                       AATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTA                                          >  2:1029871/1‑149
                                                                                                          agttcCTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAC                                       <  1:753976/144‑1
                                                                                                          AATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGGCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTCACCCGCTTTTTTCTCCCGTAAATCCCTTGAATCAGCCTCTTTTGAC                                       >  2:1146339/1‑149
                                                                                                            TTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTATACCG                                     >  1:108586/1‑149
                                                                                                            TTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAGCAGCCTACTTAGAACG                                     >  2:894898/1‑149
                                                                                                             TACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGT                                    <  1:396927/149‑1
                                                                                                               CTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTT                                  <  1:1238791/149‑1
                                                                                                               CTTCGCCGGAATTTCTTTCAGCACTTCAGTCAGCGAAGGTTCCACCAATCTTAGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTT                                  <  1:330224/149‑1
                                                                                                                TTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC                                 >  1:1274190/1‑149
                                                                                                                TTCGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC                                 <  1:1430493/149‑1
                                                                                                                  CGCCGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTT                               <  2:61671/149‑1
                                                                                                                  CGCCGGAATTTCTTCCAGCAGTTTAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTT                               <  2:33435/149‑1
                                                                                                                    CCGGAATTTCTTTTAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTACTTAGACCGTTTCTTCG                             <  1:1338169/149‑1
                                                                                                                     CGGAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTTATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGC                            <  2:570775/149‑1
                                                                                                                       GAATTTCTTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGCATCAGCCTATTTAGACCGTTTCTTCGCCA                          >  2:764542/1‑149
                                                                                                                              TTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGG                   >  2:1121562/1‑149
                                                                                                                              TTTCAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGCTTGGGACTCATATTTCTCCCGTAAATGCCTTGAATCAGCCTGTTTCGACCGTTGCTTGGCCATTTGAGG                   >  1:700125/1‑149
                                                                                                                                 CAGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGT                <  2:1274190/149‑1
                                                                                                                                  AGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTT                                                                            <  2:740853/88‑1
                                                                                                                                  AGCAGTTCAGTCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTT                                                                            >  1:740853/1‑88
                                                                                                                                     AGTTCAGTCATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATC            <  2:1119942/149‑1
                                                                                                                                           tgCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGT      >  2:544287/3‑149
                                                                                                                                            TCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTTTTTTTAATGCCTTAAATCCGCCTATTTAGACCGTTTCTTCGCCATTTAATGCGTTCTCCGCCGTT     >  2:1232320/1‑149
                                                                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTTTTTTTTTTTCCTTGAATCAGCGTATTTAGACAGTTTCTTCGCCATTTAAGGTCGTATCCCCAGTTTT   >  2:1082759/1‑149
                                                                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTT   >  2:1060839/1‑149
                                                                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTT   <  1:1137158/149‑1
                                                                                                                                              AGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTACCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTACCCCCAGTTat   >  2:1250921/1‑147
                                                                                                                                              AGGGAAGGTGCGAATAAGCCGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTT   <  2:457006/149‑1
                                                                                                                                              AGGGAAGGCGCGAATAAGCGGGGACATTCTTCTCGCCTGACTCAGTCATTTCATTTCTTCATGTTCGAGCCGATTTTTTCTCCCGTACATGCCTTGACTCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTT   <  1:2174/149‑1
                                                                                                                                               GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  1:1294850/1‑149
                                                                                                                                               GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  1:966819/1‑149
                                                                                                                                               GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  1:1089761/1‑149
                                                                                                                                               GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  <  1:1042230/149‑1
                                                                                                                                                                                                                                                                                                    
ACGTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAATGAAGGATGAAACTGCCGGAAGGCGATTAAACGCCATCCGGCAGCAAATCAAATAATTACTTCGCCGGAATTTCTTTCAGCAGTTCAGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/254151‑254294
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTT  >  NC_000913_3_pae_tpiA/273955‑274102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.