mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 195 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 220861 | NA (NA) | 21 (0.280) | 15/262 | 5.3 | NA | noncoding (604/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | CP009273 | = 220890 | NA (NA) | noncoding (633/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | CP009273 | 2721606 = | NA (NA) | 17 (0.220) | 14/266 | 5.6 | NA | noncoding (938/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | CP009273 | 2721705 = | NA (NA) | noncoding (839/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | CP009273 | 2723362 = | NA (NA) | 19 (0.250) | 13/262 | 5.8 | NA | noncoding (1155/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon |
| ? | CP009273 | 2723400 = | NA (NA) | noncoding (1117/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon | |||||
| * | ? | CP009273 | 2721617 = | NA (NA) | 20 (0.270) | 12/262 | 6.2 | NA | noncoding (927/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | CP009273 | 2721695 = | NA (NA) | noncoding (849/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | CP009273 | = 678703 | 76 (0.960) | 12 (0.150) | 12/270 | 6.3 | 12.9% | coding (147/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription |
| ? | CP009273 | = 678742 | 88 (1.130) | coding (108/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription | |||||
| * | ? | CP009273 | = 221579 | NA (NA) | 13 (0.160) | 12/274 | 6.4 | NA | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | CP009273 | = 221677 | NA (NA) | noncoding (1420/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | CP009273 | 496900 = | NA (NA) | 11 (0.140) | 11/264 | 6.5 | 10.3% | noncoding (1/84 nt) | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | CP009273 | 496984 = | 96 (1.260) | intergenic (+99/+34) | gsk/ybaL | inosine/guanosine kinase/inner membrane putative NAD(P)‑binding transporter | |||||
| * | ? | CP009273 | 2848424 = | 66 (0.830) | 12 (0.160) | 11/266 | 6.6 | 15.2% | coding (728/2079 nt) | fhlA | formate hydrogenlyase transcriptional activator |
| ? | CP009273 | 2848521 = | 70 (0.910) | coding (825/2079 nt) | fhlA | formate hydrogenlyase transcriptional activator | |||||
| * | ? | CP009273 | 270331 = | NA (NA) | 13 (0.180) | 10/258 | 6.8 | NA | noncoding (126/335 nt) | IS911 | repeat region |
| ? | CP009273 | 270374 = | NA (NA) | noncoding (169/335 nt) | IS911 | repeat region | |||||
| * | ? | CP009273 | = 221085 | NA (NA) | 10 (0.130) | 10/260 | 6.8 | NA | noncoding (828/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | CP009273 | = 221128 | NA (NA) | noncoding (871/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||