| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,490,954 | (T)5→4 | coding (53/531 nt) | cybB → | cytochrome b561 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,490,950 | 0 | T | . | 100.0% | 45.6 / NA | 11 | coding (49/531 nt) | cybB | cytochrome b561 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (8/3); total (8/3) | |||||||||||
CGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCATC > NC_000913/1490873‑1491024 | cGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCtttt < 1:273363/81‑1 (MQ=255) ttATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGtt < 2:273364/81‑1 (MQ=255) gTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCg > 1:720539/1‑81 (MQ=255) cAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTa > 2:273383/1‑81 (MQ=255) aaaaTAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGtt > 1:273397/1‑81 (MQ=255) atTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGttt > 1:273392/1‑81 (MQ=255) atTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGttt > 2:273387/1‑81 (MQ=255) ttACAAATCAGCATTCACTGGCTGGTC‑TTTAACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCAc > 2:273418/1‑81 (MQ=255) aaTCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGc > 1:797462/1‑81 (MQ=255) aGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATc < 1:273365/81‑1 (MQ=255) cACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCAc > 1:273390/1‑81 (MQ=255) gctggTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACtcatc < 1:273366/81‑1 (MQ=255) | CGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCATC > NC_000913/1490873‑1491024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |