| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,044,771 | Δ1 bp | intergenic (+147/‑167) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,044,768 | 0 | C | . | 100.0% | 55.8 / NA | 13 | intergenic (+144/‑170) | asnT/yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (5/8); total (5/8) | |||||||||||
AGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGT > NC_000913/2044692‑2044844 | aGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTccctc > 2:365260/1‑79 (MQ=255) gCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTccctc > 1:365265/1‑78 (MQ=255) tttttAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATtat < 1:365236/81‑1 (MQ=255) tttAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATtata > 1:365258/1‑80 (MQ=255) tttAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATtata > 2:365254/1‑80 (MQ=255) aaGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGtt < 1:365237/80‑1 (MQ=255) cccTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCag < 1:365238/81‑1 (MQ=255) aCCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGtct > 2:365267/1‑81 (MQ=255) tGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACAccc > 1:365261/1‑80 (MQ=255) gCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCa < 1:365239/80‑1 (MQ=255) tGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAAc < 1:365240/80‑1 (MQ=255) gAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGTAACTCACACCCAAAACTg > 1:365257/1‑81 (MQ=255) aCCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGaaa < 1:365241/81‑1 (MQ=255) ccATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGaaaa < 1:365242/81‑1 (MQ=255) ccATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGaaaa < 1:365243/81‑1 (MQ=255) attttCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGt < 1:365244/80‑1 (MQ=255) | AGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGT > NC_000913/2044692‑2044844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |