| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,667,617 | (A)6→5 | intergenic (‑37/+174) | gadA ← / ← ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,667,612 | 0 | A | . | 100.0% | 45.6 / NA | 11 | intergenic (‑32/+179) | gadA/ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (4/7); total (4/7) | |||||||||||
AATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGA > NC_000913/3667535‑3667684 | aaTCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATaaa > 2:675440/1‑80 (MQ=255) gtagtTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATaaaaagtag > 1:675435/1‑76 (MQ=255) gtTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGAtt < 2:675420/81‑1 (MQ=255) tCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTa > 1:675436/1‑81 (MQ=255) gTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCa < 1:675421/81‑1 (MQ=255) ttAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCaa < 1:675422/81‑1 (MQ=255) tAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAg > 1:675443/1‑81 (MQ=255) gTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAg < 1:675423/78‑1 (MQ=255) cGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTa < 2:675424/80‑1 (MQ=255) cTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACa > 1:675441/1‑80 (MQ=255) atttatttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATcc < 1:675425/81‑1 (MQ=255) tttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAg < 1:675426/80‑1 (MQ=255) aaGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGa > 2:675439/1‑80 (MQ=255) | AATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAGA > NC_000913/3667535‑3667684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |