| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,578,871 | A→G | F158L (TTC→CTC) | yddA ← | ABC transporter family protein YddA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,578,871 | 0 | A | G | 100.0% | 70.7 / NA | 20 | F158L (TTC→CTC) | yddA | ABC transporter family protein YddA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (5/15); total (5/15) | |||||||||||
AACAGTGAATGAGAGCGTACCCGCGCTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAAGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATCTGTA > NC_000913/1578794‑1578947 | aaCAGTGAATGAGAGCGTACCCGCGCTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGc > 2:287897/1‑80 (MQ=255) aTGAGAGCGTACCCGCGCTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGaaa < 1:287873/81‑1 (MQ=255) cccGCGCTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGtt > 1:287901/1‑81 (MQ=255) cTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTg < 2:287874/81‑1 (MQ=255) tCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGAt < 1:287876/80‑1 (MQ=255) tCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGAt < 2:287875/80‑1 (MQ=255) aaTAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAagag < 2:287877/81‑1 (MQ=255) ggTAAAGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTc < 1:287878/81‑1 (MQ=255) aaGGTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTc < 1:287879/80‑1 (MQ=255) ggTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGc > 1:287904/1‑81 (MQ=255) ggTGATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGc < 1:287880/81‑1 (MQ=255) gATCAGCATGCTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGa > 1:287893/1‑80 (MQ=255) cTAAGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCa < 2:287881/81‑1 (MQ=255) aGTGACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAg < 2:287883/79‑1 (MQ=255) aGTGACTGGATGAGGCCAAATGAAAGACTGAACGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAggg < 2:287882/81‑1 (MQ=255) gACTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTa > 2:287905/1‑81 (MQ=255) cTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATc < 1:287885/81‑1 (MQ=255) cTGGATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATc < 2:287884/81‑1 (MQ=255) gATGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATCTGt < 1:287886/81‑1 (MQ=255) aTGAGGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATCTGTa < 1:287887/81‑1 (MQ=255) | AACAGTGAATGAGAGCGTACCCGCGCTTTCCCAAAGAATAACGGTAAAGGTGATCAGCATGCTAAGTGACTGGATGAAGCCAAATGAAAGACTGAGCGTTTTGCTGATCAGTAAGAGAATGTCTTCAGCGATACGTTGGTCAGGGTTATCTGTA > NC_000913/1578794‑1578947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |