Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,995,748 | C→G | L32V (CTT→GTT) | yecU → | protein YecU |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,995,748 | 0 | C | G | 100.0% | 31.9 / NA | 10 | L32V (CTT→GTT) | yecU | protein YecU |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (7/3); total (7/3) |
GGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCA > NC_000913/1995673‑1995799 | ggTCATTACATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTAt < 2:357148/80‑1 (MQ=255) tacatTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATAc > 2:357162/4‑81 (MQ=255) aCGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTccgccg > 2:357163/1‑81 (MQ=255) ttttATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTa < 2:357149/81‑1 (MQ=255) aCTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACAttttt > 2:357161/1‑80 (MQ=255) atatCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCa > 2:357159/1‑80 (MQ=255) aCGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAAtttt > 1:357170/1‑81 (MQ=255) gCTCAAAAAACAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCa > 2:357158/1‑81 (MQ=255) aaaaaaCAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTg > 1:357166/1‑80 (MQ=255) aaaaaCAACCACTGCTATTTTTAGCAAAGGTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCa < 2:357150/81‑1 (MQ=255) | GGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCA > NC_000913/1995673‑1995799 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |