| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,259,134 | T→A | N55Y (AAC→TAC) | psuK ← | putative pseudouridine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,259,134 | 0 | T | A | 100.0% | 61.7 / NA | 17 | N55Y (AAC→TAC) | psuK | putative pseudouridine kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (7/10); total (7/10) | |||||||||||
CCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAA > NC_000913/2259058‑2259210 | ccAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAAccc < 1:402858/81‑1 (MQ=255)ccAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAAccc < 1:402857/81‑1 (MQ=255) tgattgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAAc > 2:402886/1‑81 (MQ=255) attgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGc < 1:402859/81‑1 (MQ=255) attgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGc < 1:402860/81‑1 (MQ=255) tttGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGt > 2:857057/1‑81 (MQ=255) cGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGtttt < 2:402861/80‑1 (MQ=255) gTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTtgt > 2:402885/1‑81 (MQ=255) gcagcGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCaa > 1:402879/1‑81 (MQ=255) aTTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTgc < 2:402862/81‑1 (MQ=255) aTTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTgc < 2:402863/81‑1 (MQ=255) tAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACt < 1:402864/81‑1 (MQ=255) aaaTCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTcca > 1:402902/1‑81 (MQ=255) aCTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAgg > 1:402883/1‑81 (MQ=255) aCTGCCTACGGCGCTCAGTAGCCAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAg < 2:402865/80‑1 (MQ=255) ccAGGCTTTGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTgg < 1:402866/81‑1 (MQ=255) ttGTAACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGaa > 2:402887/1‑81 (MQ=255) | CCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAA > NC_000913/2259058‑2259210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |