| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,108,352 | (A)5→4 | coding (590/1158 nt) | opgC ← | protein required for succinyl modification of osmoregulated periplasmic glucans |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,108,348 | 0 | A | . | 100.0% | 63.7 / NA | 16 | coding (594/1158 nt) | opgC | protein required for succinyl modification of osmoregulated periplasmic glucans |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/9); total (7/9) | |||||||||||
AAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATCGAGAATT > NC_000913/1108271‑1108424 | aaGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAATaaaa < 1:202167/81‑1 (MQ=255) gAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAATaaaatc > 1:202189/1‑79 (MQ=255) aaTAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGTATGGGCGGATACACAAT‑AAAATCGTtcttct > 2:202192/1‑81 (MQ=255) aaTAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTtcttct > 2:202193/1‑81 (MQ=255) aTAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTcttctt < 2:202168/81‑1 (MQ=255) aaaCAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCttatt < 2:202169/81‑1 (MQ=255) aaCAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCttatta > 2:202186/1‑81 (MQ=255) gTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCa > 2:202194/1‑80 (MQ=255) tttGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCAt > 1:202188/1‑80 (MQ=255) cATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAAcc < 2:202170/80‑1 (MQ=255) cAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGcc < 1:202171/81‑1 (MQ=255) aaTAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCg < 2:202173/81‑1 (MQ=255) aaTAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCg < 2:202172/81‑1 (MQ=255) ccATTACTCAGAATGGGCGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATc < 2:202174/80‑1 (MQ=255) cGGATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATc < 1:202175/81‑1 (MQ=255) ggATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATc > 1:202196/1‑80 (MQ=255) ggATACACAAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATc > 2:202198/1‑80 (MQ=255) acaAT‑AAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATCGAGAAtt < 1:202176/81‑1 (MQ=255) | AAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAATAAAAATCGTTCTTCTTATTACCGCATAACCGATGCCGAGGCATAAAAAAATCACCGATAGTTTTACCATCGAGAATT > NC_000913/1108271‑1108424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |