| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 152,807 | (T)5→4 | coding (6/570 nt) | yadM ← | putative fimbrial protein YadM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 152,803 | 0 | T | . | 100.0% | 45.7 / NA | 12 | coding (10/570 nt) | yadM | putative fimbrial protein YadM |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (5/7); total (5/7) | |||||||||||
TTAATATCCGTTGCAAATACTGAGGGTGATAATAATATTCCCATCAGTATCACTATTTTATGTGGCGTTGTTTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGAATAATAGATTGTGCTAT > NC_000913/152733‑152876 | ttAATATCCGTTGCAAATACTGAGGGTGATAATAATATTCCCATCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCAttt > 2:33355/1‑81 (MQ=255) aGGGTGATAATAATATTCCCATCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTg < 1:33330/79‑1 (MQ=255) ggTGATAATAATATTCCCATCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATc < 2:33331/81‑1 (MQ=255) tatTCCCATCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAAt > 2:33369/1‑81 (MQ=255) ttCCCATCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTc > 1:33356/1‑81 (MQ=255) aTCAGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTc < 1:33332/81‑1 (MQ=255) aGTATCACTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAg < 2:33333/80‑1 (MQ=255) aCTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGaataat < 2:33334/80‑1 (MQ=255) aCTATTTTATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGaataa > 1:33360/1‑79 (MQ=255) ttttATGTGGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGAATAATAGAt < 1:33335/80‑1 (MQ=255) tgtgGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGAATAATAGATTGTGCt < 1:33336/81‑1 (MQ=255) tgGCGTTG‑TTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGAATAATAGATTGTGCTAt > 1:33358/1‑81 (MQ=255) | TTAATATCCGTTGCAAATACTGAGGGTGATAATAATATTCCCATCAGTATCACTATTTTATGTGGCGTTGTTTTTATCATTTGACGTCCCTTGTAGTTACTGAATCTGACACCGAATTCCATTCAGAATAATAGATTGTGCTAT > NC_000913/152733‑152876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |