| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,435,732 | (A)5→4 | intergenic (‑113/+28) | uspF ← / ← ompN | nucleotide binding filament protein/outer membrane porin N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,435,728 | 0 | A | . | 100.0% | 50.4 / NA | 13 | intergenic (‑109/+32) | uspF/ompN | nucleotide binding filament protein/outer membrane porin N |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (4/9); total (4/9) | |||||||||||
GTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGG > NC_000913/1435649‑1435800 | gtgtAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGaa < 2:246410/81‑1 (MQ=255) tAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGaaaa < 2:246411/80‑1 (MQ=255) aTGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATa < 2:246412/81‑1 (MQ=255) acTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGc < 1:246413/81‑1 (MQ=255) tttGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCgg < 1:246414/79‑1 (MQ=255) ttGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGc < 1:246415/80‑1 (MQ=255) tgtAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCag > 1:246432/1‑79 (MQ=255) tAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCaggag < 1:246416/80‑1 (MQ=255) gACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGAtt > 1:246433/1‑80 (MQ=255) gACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGAtt > 2:246436/1‑80 (MQ=255) ttCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTg < 1:246417/81‑1 (MQ=255) tttAGATCAAAGGAGGAAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCt < 2:246418/81‑1 (MQ=255) ggaAGAATAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATatc < 1:246419/81‑1 (MQ=255) gaagaaTAAGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATatca < 2:246420/81‑1 (MQ=255) aaGCAG‑AAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCgg > 2:246441/1‑78 (MQ=255) | GTGTAACGCCAGATGACACTTTTTGTGTAATGACGGAGTTCACATTTTTAATTTAGATCAAAGGAGGAAGAATAAGCAGAAAAAGCCCGCCATAACAGCGGGCAGGAGGATTTAGAACTGATAAACCAGACCTAAAGCGACAATATCATCGG > NC_000913/1435649‑1435800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |