| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,481,929 | (T)5→4 | coding (1021/1293 nt) | ynbD → | putative phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,481,925 | 0 | T | . | 100.0% | 55.4 / NA | 14 | coding (1017/1293 nt) | ynbD | putative phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (8/6); total (8/6) | |||||||||||
ATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACAT > NC_000913/1481849‑1482001 | atatTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTAttttg > 1:252261/1‑80 (MQ=255) ccGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTa < 2:252239/80‑1 (MQ=255) gCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATc > 1:252267/1‑81 (MQ=255) ggTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCtg > 2:252270/1‑81 (MQ=255) ttCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCtggt < 1:252240/81‑1 (MQ=255) ggACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGtt > 2:252264/1‑81 (MQ=255) tCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGa < 1:252241/81‑1 (MQ=255) tttGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAgg > 1:252266/1‑81 (MQ=255) tGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAgggg > 2:252262/1‑81 (MQ=255) cccTCGCGGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTc > 2:252271/1‑81 (MQ=255) gcgGACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACa < 1:252242/81‑1 (MQ=255) gACGAGCCACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGc > 1:252268/1‑81 (MQ=255) ccACAAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGc > 2:252265/1‑81 (MQ=255) acaAAAGATCGACTCTA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGa < 1:252243/81‑1 (MQ=255) ctctA‑TTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACAt < 1:252244/81‑1 (MQ=255) | ATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACAT > NC_000913/1481849‑1482001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |