Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	179,608	Δ1 bp	coding (372/1518 nt)	dgt →	dGTP triphosphohydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	179,606	0	T	.	100.0%	93.8 / NA	23	coding (370/1518 nt)	dgt	dGTP triphosphohydrolase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (10/13);  total (10/13)

GGATGAACTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCGTTTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAAGCCAGC  >  NC_000913/179533‑179681                                                                          |                                                                            ggATGAACTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCAt                                                                     >  1:38976/1‑81 (MQ=255)        cTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCg                                                              <  1:38933/81‑1 (MQ=255)          gACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCg                                                              >  1:689264/1‑79 (MQ=255)            ccGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAgc                                                          <  2:38935/81‑1 (MQ=255)            ccGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAgc                                                          <  2:38934/81‑1 (MQ=255)              ggTACCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAgcgg                                                        <  2:38936/81‑1 (MQ=255)                 cccTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGa                                                     >  1:38966/1‑81 (MQ=255)                      tGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATaaa                                                 <  2:38937/80‑1 (MQ=255)                       gAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAAt                                                >  1:38977/1‑80 (MQ=255)                                 ttgAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTc                                      <  2:38938/80‑1 (MQ=255)                                         tCATGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGt                              <  1:38939/80‑1 (MQ=255)                                           aTGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTg                           <  2:38940/81‑1 (MQ=255)                                            tGCCTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGc                          <  2:38941/81‑1 (MQ=255)                                              ccTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCa                         <  1:38942/80‑1 (MQ=255)                                              ccTGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCAc                        <  2:38943/81‑1 (MQ=255)                                                tGATGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCAccc                      >  2:38973/1‑81 (MQ=255)                                                  aTGCACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCgg                    <  1:38944/81‑1 (MQ=255)                                                     cACGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAg                 <  2:38945/81‑1 (MQ=255)                                                       cGATATCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGAt               >  1:38969/1‑81 (MQ=255)                                                           atCGGCAATCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGcc            >  1:38986/1‑80 (MQ=255)                                                                 aaTCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAagc      >  1:38974/1‑80 (MQ=255)                                                                  aTCCGCCG‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAagc      >  2:38987/1‑79 (MQ=255)                                                                    ccgccg‑TTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAagccagc  >  1:38970/1‑81 (MQ=255)                                                                          |                                                                            GGATGAACTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCGTTTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAAGCCAGC  >  NC_000913/179533‑179681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑