| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,791,609 | Δ1 bp | coding (412/714 nt) | ydiV ← | anti‑FlhDC factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,791,606 | 0 | G | . | 100.0% | 32.7 / NA | 9 | coding (415/714 nt) | ydiV | anti‑FlhDC factor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (4/5); total (4/5) | |||||||||||
TCCAGCATGACGCGGGTGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAAGGGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCATTGAGATGCGGGTAATTCTCATTAA > NC_000913/1791527‑1791680 | tCCAGCATGACGCGGGTGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAAgg > 2:288657/1‑81 (MQ=255) cAGCATGACGCGGGTGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAAggga > 2:288658/1‑80 (MQ=255) aGCATGACGCGGGTGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAAggga > 2:288652/1‑79 (MQ=255) tGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGAt > 2:288654/1‑79 (MQ=255) aaaaGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAgg < 2:288639/81‑1 (MQ=255) aCCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGAt < 1:288640/81‑1 (MQ=255) gCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTAt < 1:288641/81‑1 (MQ=255) cATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCtttt > 2:288650/1‑81 (MQ=255) gCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCAtt > 2:288655/1‑77 (MQ=255) gCCTGCTCCCAAATTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCAtt > 2:288659/1‑77 (MQ=255) aaTTACCTAACACAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCATTGAGATGCGGGTAAtt < 2:288642/81‑1 (MQ=255) acacAA‑GGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCATTGAGATGCGGGTAATTCTCATTaa < 1:288643/80‑1 (MQ=255) | TCCAGCATGACGCGGGTGAAAAGACCATCAAAAACCGCTTTCATTGTGCTATTGCCTGCTCCCAAATTACCTAACACAAGGGGATACACTTGCGATAAGGATAAAAGACCGCGATTATCTTTTCCTTCATTGAGATGCGGGTAATTCTCATTAA > NC_000913/1791527‑1791680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |