| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,044,771 | Δ1 bp | intergenic (+147/‑167) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,044,768 | 0 | C | . | 100.0% | 32.7 / NA | 9 | intergenic (+144/‑170) | asnT/yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (6/3); total (6/3) | |||||||||||
GCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGT > NC_000913/2044693‑2044844 | gCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTccctc < 2:322755/80‑3 (MQ=255) ttttAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATtat > 2:322776/1‑80 (MQ=255) aaCATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAAc > 1:322772/1‑81 (MQ=255) aaGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGt < 2:322756/79‑1 (MQ=255) gACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGtc > 2:322775/1‑81 (MQ=255) ttATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTcccc > 2:322778/1‑81 (MQ=255) gTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCtt < 1:322757/80‑1 (MQ=255) ttGCTATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACAcc > 2:322774/1‑80 (MQ=255) tATGAACGCCATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCaaaa > 2:322773/1‑81 (MQ=255) cATCACCATTTT‑CCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAAc < 2:322758/81‑1 (MQ=255) attttCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGt > 1:322790/2‑81 (MQ=255) | GCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGT > NC_000913/2044693‑2044844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |